KEGG   Rattus norvegicus (rat): 361859
Entry
361859            CDS       T01003                                 
Symbol
Cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    361859 (Cdc40)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 WDR54 PQQ_2
Other DBs
NCBI-GeneID: 361859
NCBI-ProteinID: NP_001381149
RGD: 1307063
Ensembl: ENSRNOG00000000581
Position
20:complement(45855739..45908239)
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcagctctagctgcttcctatggctcgggttcggggtccgaatcg
gactcggacagtgagggcagtcggtgcccactgccggccgcggactctctcatgcacttg
accaaatcgccttcagccaagccctctctgacggtggcggtggactcggctccggaggtg
gcagttaaggaagatctggagaccggagttcaccttgaccctgctgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttcga
acacagcaaatggctgcccctcgaaatatgctttctggatatgcagagccagcacacatc
aacgacttcatgttcgaacagcagagaaggacatttgccacatacggctatgcactggac
ccttcgctagataatcatcaagtgtctgccaaatacatcggctctgtggaagacgctgag
aagaaccaaggcttaactgtttttgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaacgatgcatctaatattgatggtttcttgggaccgtgggcaaaatacgtg
gatgaaaaagatgtggccaagccttcagaagaagaacaaaaggagttggatgaaatcaca
gcaaagaggcagaagaaaggcaaacaggaggaagagaagcctggggaggagaagaccatc
ctacatgttaaagaaatgtatgactatcaaggcaggtcctacctccacatccctcaggat
gttggtgttaacctgcgctcatctgtgccacctgagaaatgttaccttcccaaaaaacaa
atccacgtgtggtccggacacacaaagggcgtcagtgctgtcaggctgtttcctctttcc
ggacatttgttgctgtcttgctccatggactgtaaaattaagctatgggaagtttatgga
gaccggcgctgtctgagaacatttattggtcacagtaaagctgtgagagacatctgcttc
aacactgcaggaacacagttcctcagtgcggcctacgaccggtaccttaaactctgggac
accgagacaggacagtgtatatcaagatttacaaaccgcaaagtaccctattgcgtcaag
ttcaatcccgatgaagataagcagaatctctttgtggccgggatgtctgataaaaagatt
gtacagtgggacattcgcagcggagagattgttcaagagtacgatcggcatttgggggct
gtcaacacgattgtctttgtggatgagaaccgaagatttgtgagtacgtctgatgataaa
agcctacgagtttgggaatgggatatccctgtggactttaagtacatagcagagcctagc
atgcactcaatgccggcagtgactttgtctccaaatgggaaatggctagcatgccagtcc
atggataaccaaatcttaatatttggagcacagaacagattcagattgaataagaagaaa
atttttaagggccacatggtagcaggctatgcttgtcaggtggacttctcaccagacatg
agctatgtgatttcgggagatggaaatgggaaattaaacatttgggactggaagaccaca
aaactctacagtcgcttcaaagcccatgataaagtgtgcatcggcgccgtgtggcaccct
cacgagacgtccaaggtcatcacgtgcggctgggacggcctcatcaagctgtgggattag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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