KEGG   Rattus norvegicus (rat): 361927
Entry
361927            CDS       T01003                                 
Symbol
Fxr1
Name
(RefSeq) RNA-binding protein FXR1 isoform 4
  KO
K15516  fragile X mental retardation protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    361927 (Fxr1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     361927 (Fxr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     361927 (Fxr1)
   mRNA cycle factors
    Stress granule specific factors
     361927 (Fxr1)
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 KH_9 Tudor_FRX1 KH_1 Agenet KH_2
Other DBs
NCBI-GeneID: 361927
NCBI-ProteinID: NP_001012179
RGD: 1311733
Ensembl: ENSRNOG00000051480
UniProt: Q5XI81 A0A0G2JWD2
Position
2:118812287..118865813
AA seq 568 aa
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYATDESTVSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLGKRCD
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgtccacgaagactccctcacagttgtttttgaaaataattggcaaccagaacgc
caggttccgtttaatgaagttcgattaccaccaccacctgatataaaaaaagaaattagt
gaaggagatgaagtagaggtatattcaagagcaaatgaccaagaaccatgtggatggtgg
ctggctaaagttcggatgatgaaaggcgagttttatgtcattgaatatgctgcttgtgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaagtgcacagtggatgttcctgaggatttgagagaagcg
tgtgctaatgaaaatgcccataaagatttcaagaaagcagtaggagcgtgcagaattttc
tatcatcctgaaactacccagctaatgatactgtcggccagtgaagcaactgtgaagaga
gtaaatatcttaagtgatatgcatttgcgaagtattcggacgaagttgatgcttatgtcc
agaaatgaagaggccactaagcatttagaatgcacaaaacagcttgcagcagcttttcat
gaagaatttgttgtgagagaagatctaatgggcctggcaataggaacgcatggtagtaac
atacagcaagctaggaaggtccctggagttactgccattgagttagatgaagatactgga
acgtttagaatctacggagagagtgctgaggctgtaaagaaagcaagaggtttcttggaa
tttgtggaagattttattcaagttcccaggaatcttgttggaaaagttattggaaaaaat
ggcaaagttattcaagaaatagtggataaatctggtgtggttcgagtaagaattgaagga
gacaatgaaaataaactacctagagaagatggaatggttccatttgtatttgttggcact
aaagaaagtattggaaatgtgcaagttcttctagagtatcacattgcttacttaaaggaa
gtggaacaactaagaatggaacgcctgcagatcgatgaacagctgcgacagattggtatg
ggtttcagaccttcttccaccagagggcctgaaaaagagaaaggatatgccactgatgaa
agtaccgtctcttctgtacaaggttctaggtcttatagtggaagaggcagaggtcgtcgg
ggccctaattacacctccggttatggtacaaattctgagctgtctaacccctccgaaaca
gaatctgagcgtaaagatgagctgagtgattggtcattggcaggagaagatgatcgagag
actcgacatcagcgagacagcaggagacgcccaggaggaagaggcagaagtgtttctggg
ggacgaggtcgtggtggaccacgtggtggcaaatcctccatcagttctgtgctcaaagat
ccagacagcaatccatacagcttacttgataatacagaatcagatcagactgcagacact
gacgccagcgaatctcaccacagtactaaccgtcgtaggcggtctcgtagacgaaggact
gatgaagatgctgttctgatggatggaatgactgaatctgatacagcctcagttaatgag
aatgggctaggcaaaagatgtgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (20)   
   RefSeq(nuc) (12)   
   GenBank (4)   
   EMBL (4)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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