KEGG   Rattus norvegicus (rat): 361946
Entry
361946            CDS       T01003                                 
Symbol
Supt20h
Name
(RefSeq) transcription factor SPT20 homolog
  KO
K21245  transcription factor SPT20 homolog
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    361946 (Supt20h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    361946 (Supt20h)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     361946 (Supt20h)
SSDB
Motif
Pfam: Spt20_SEP
Other DBs
NCBI-GeneID: 361946
NCBI-ProteinID: NP_001382528
RGD: 1307812
Ensembl: ENSRNOG00000059480
Position
2:141047479..141080656
AA seq 737 aa
MQQALEQALDRAEYIVESAQQRPPKRKCLSSGRKSIFQKLYDLYVEECEKEPEVKKLRRN
VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLVCDVHSI
TSDNHKWTQEDKLLLESQLILATAEPLCLDPSVAVACTANRLLYNRQKMNTRPMKRCLKR
YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
AVPSEVDVEKYAKVEKSIKSDDSQPTMWPAHDVKDDYVFECEGGNQYQKTKLTILQSLGD
PLYYGKIQPWKADEESDSQMSPSHSSADDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
VKMSHSSSGSASLNSGEEGEPETSSIQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTAQ
QASSFLKSPTPPPPSSKPSLSRKSSVDLSQVSMLSPAALSPASSSQRSTVSPVMADSAGL
NSISVVSSAGGAQALKSGSNSMLGCDTGAIPPAGQSLCSSGLLPSGGLITNALPSAMQAA
PQAGIPFGLKNTSSLRPLNLLQGPEQGLAAQEPALTAQQAAVVNLTGVGGFTPSQAAVLS
QLGSAENRPEQTLPQQRLQLSSAFQQQQQQLQQLRFLQHQMAMAAAAAQTAQLHRHRQAG
SQSKSKVKRGMPTTPKF
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgcagcaagctctggaacaagctttggatcgtgcagagtatatcgtcgaaagcgctcag
cagaggcctccgaaaaggaaatgcctgtctagtggaagaaagtctatatttcaaaaactt
tatgacttatatgttgaagaatgtgaaaaagagcccgaggttaagaaattaagaagaaat
gtgaacttgttagagaagcttgttatgcaagagacattgtcatgtttagtggtcaatctt
tacccaggaaatgaagggtattccctgatgctgaggggaaaaaacggatcagattctgag
accatccgattgccttatgaagaaggggagttgcttgaatacttagatgcagaagaatta
cctcctattttggttgatctccttgaaaaatcacaggttaatatttttcactgtggatgt
gtgatagcagaaatccgtgactacaggcagtccagtaatatgaagtctcctggttaccaa
agtaggcatattctcttacgcccaacaatgcagactttagtctgtgatgtccattctata
acaagtgacaaccataaatggacccaggaagacaaacttttgcttgagagccagctgatt
ctagctacagcagaaccactgtgtcttgacccatctgtggcagtagcatgcacggccaat
aggctgctctataaccggcagaagatgaacactcgcccaatgaaacggtgtttgaagagg
tactccaggtcctccctgaaccggcagcaggacctctctcactgtcctcctccccctcag
ctgagattacttgatttcttacaaaagaggaaggaaaggaaagcaggtcagcattatgac
ctcaaaatttccaaagcaggaaattgtgtagacatgtggaaacggagcccctgtaacttg
gctgtgccttctgaagtagatgtggagaaatatgctaaagtggagaaatcgattaaatct
gatgactcacagccaaccatgtggccagctcatgatgtaaaagacgattatgtatttgaa
tgtgaaggtggtaatcagtatcagaaaacaaagctgaccatcttgcagtctcttggtgat
ccactttactacggtaaaatacagccgtggaaagcagatgaagaaagtgacagccagatg
tctccatcccactcctctgctgatgatcattcaaactggtttattattgggtcaaagact
gacgcagagagggtggttaatcaataccaggagttggtccagaatgaagccaaatgccca
gtgaagatgtctcacagctctagtggttccgccagtctcaattctggagaggagggagaa
ccggagacttcctccattcagtcttcagttttgggaaagggagtaaaacatcgaccccca
cccatcaaacttccctcaagctcaggaaatagttcctcaggtaactatttcacagcacag
caggccagcagcttccttaaatctccaactcctccaccgccatcatcgaagcccagcctt
tctcggaagtcatctgtggatctcagtcaagttagcatgctttctcctgctgccctgtca
cctgccagctcatcccagagaagcacggtctccccggtcatggcagactctgctgggctt
aactccatcagtgtagtgagctctgctggtggagcccaggctctgaagagtggctcaaac
tccatgctgggctgtgacactggggccatacctcctgcaggacaaagcctgtgcagcagc
ggccttctgccatcaggaggtctcataacaaatgcactgcccagtgccatgcaggcagct
cctcaagcaggtatcccatttggtttaaaaaatacttcaagtctcaggcctttaaatcta
ctccagggtcctgaacaagggctagctgctcaagaaccagccttaactgcgcagcaagct
gctgttgttaatcttactggagtaggaggctttacgccgtcacaggcagctgtgttgtct
cagcttggctctgccgagaacagaccagagcaaacccttcctcagcagagactccagctc
tcctctgcctttcagcagcagcagcagcagctacaacagttgcgattcttgcagcatcaa
atggctatggcagcagccgccgcacaaacagcccagctccatcgtcaccggcaggcaggc
agccagtcaaagagtaaagtgaagagaggcatgccaaccactccaaaattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (51)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (49)   
DNA sequence (52)   
   RefSeq(nuc) (50)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (114)   

Download RDF
DBGET integrated database retrieval system