KEGG   Rattus norvegicus (rat): 361970
Entry
361970            CDS       T01003                                 
Symbol
Trim2
Name
(RefSeq) tripartite motif-containing protein 2
  KO
K11997  tripartite motif-containing protein 2/3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    361970 (Trim2)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    361970 (Trim2)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 DUF4934 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 SBBP PAF-AH_p_II Caskin-tail zf-RING_11 ALMT
Other DBs
NCBI-GeneID: 361970
NCBI-ProteinID: NP_001102022
RGD: 1310981
Ensembl: ENSRNOG00000010124
UniProt: D3ZQG6 D3ZM62
Position
2:complement(171798654..171950193)
AA seq 761 aa
MQRAGSRTAGPTCQWSRMASEGASIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFC
ERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNGEDPSI
LQTVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKA
SLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLL
MELEVNYGLKHKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNE
LADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQP
MSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTL
SLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKR
KENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTSGKILIADSNNQCVQIFSNDGQFKSRF
GIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSNDGKFKTKIGSGKLMGPKGVSV
DRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSSNEIIITDFHN
HSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFL
SYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcagcgtgcagggtcgaggacagccggccccacatgtcagtggtctaggatggccagt
gagggcgccagcatcccgagtcctgtggtacgccagattgacaagcagtttctgatctgc
agtatatgcctggaacggtacaagaaccccaaggtcctgccctgtctgcacactttctgc
gagaggtgcctgcagaactacattccagcccacagtttaaccctctcctgcccagtgtgt
cgtcagacctccatcctgcctgagaaaggggtggctgcactccagaacaacttttttatc
acaaacctcatggatgtgctgcagcgaacgccaggcagcaacggcgaggacccttccatc
ctgcagacggtcaccgctgtggctgcaggaaagcctctatcatgcccgaaccacgatgga
aatgtgatggaattttactgccagtcctgtgagaccgccatgtgtcgggagtgcacggag
ggggagcacgcagagcaccccacagtcccgctgaaggacgtggtggagcagcataaggcc
tcactccaggtccagctggatgcagtcaacaaaagactcccagaaatagattctgctctt
cagttcatctcagaaatcatccatcagttaaccaaccaaaaggccagcattgtggacgac
atccactccacctttgatgaactgcagaagactttaaatgttcgcaagagcgtgctgctc
atggagcttgaggtcaactatggcctcaaacacaaagtgctgcagtcgcagctggatacc
ctgctccaaggccaggaaagcattaagagctgcagcaacttcacagcgcaagccctcaac
catggcacggagacggaggtgctgctggtgaagaagcagatgagcgagaagctcaacgaa
ctggcggaccaagacttcccactgcacccgcgcgagaacgatcagctggattttatcgtg
gaaactgagggattgaaaaagtctatccacaacctggggaccatcctcaccactaacgcg
gtcgcctctgagacggtggccacgggcgaggggcttcggcagaccatcatcgggcagccc
atgtccgttactataaccaccaaggacaaagacggagagctgtgcaagacaggcaacgca
tacctcaccgctgagctcagcacccccgacggcagcgtggcggacggagagatcctggac
aacaagaacggcacctacgagttcctgtatactgtgcagaaggagggggacttcaccctg
tctctcaggctctacgaccaacacatccgaggcagtccgtttaagctcaaggtcatccgc
tcggcggacgtgtcccccaccaccgagggcgtgaagcgacgagtcaagtccccagggagc
gggcacgtcaagcagaaggctgtaaagagaccggccagcatgtacagcaccggcaagcga
aaagagaaccccatcgaggacgacttgatcttccgagtgggtaccaaaggaagaaacaaa
ggagaatttacaaacctgcagggtgtggctgcatctacgagtggaaagatattaattgca
gatagtaacaaccagtgtgtgcagatcttttccaatgacggacagttcaaaagtcgtttc
ggcatccgaggtcgatccccaggacagctccagcgtcccacaggggtagcggtgcacccc
agtggggacatcatcatcgcagattatgacaacaagtgggtcagcattttctccaatgat
gggaagtttaagacaaaaattggatcaggaaaactgatggggcccaaaggagtttctgtg
gaccgcaatgggcacattattgtggtggacaacaaggcatgctgcgtgttcatctttcag
cccaacgggaaaatagtcaccaggtttggtagccgaggaaacggcgacaggcagtttgca
ggtccccattttgcagctgtgaatagcagtaatgagatcatcattacagatttccataat
cattctgtcaaggtatttaatcaggaaggagaattcatgttgaagttcggctcaaatgga
gaaggaaatgggcagtttaatgcaccaacaggtgtagccgtggactcgaatggaaacatc
attgtggctgactgggggaacagcaggatccaggtttttgatgggagtggatcatttttg
tcctatatcaacacatctgctgacccgctgtatggcccccaaggcctggctctaacttcg
gatggccacgtcgtggttgcagactccggaaaccactgcttcaaggtctatcggtactta
cagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (60)   

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