KEGG   Rattus norvegicus (rat): 362085
Entry
362085            CDS       T01003                                 
Symbol
Sohlh1
Name
(RefSeq) spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1
  KO
K22495  spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    362085 (Sohlh1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    362085 (Sohlh1)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 362085
NCBI-ProteinID: NP_001400588
RGD: 1564440
Ensembl: ENSRNOG00000033983
Position
3:complement(29061267..29065588)
AA seq 345 aa
MASGGHERATEDYGVSDITGCSKTPQTETQENLETPSQSSALCPAPVAAANWSPCLRRNV
VSERERRRRISLSCERLRALLPQFDGRREDMASVLEMSVCFLQLAHSMDPSWEQLSVPQP
PQEMWHMWQGDVLQVTLANQIADSKPDSGIAKASAVARVQDPPCCGMLDTDQSQATERAS
ELLERPSSCPESSSLGAGLPPWPPHSWQPATPEASDAVSGGSQQVGSLAGDTESPGMLAE
EANLVLASVPDARYTTGAGSEVVDGASFLLTTNPDWWLGSVEGRGGPALARNSPVDGAEP
IYIGDPEPCSQELQAGPVELWGLDFGSPGLALKDEADSIFPDFFP
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgtccggtggccacgagcgggctactgaggattacggagtctccgacattacggga
tgcagcaagactcctcagactgagactcaggagaacttggagactccctcacaaagctca
gccctctgcccagctcctgtggctgctgcaaattggagcccctgtcttcggagaaacgtg
gtcagcgagagagaacgcaggaggaggatctccttgagctgtgagcgcttgcgggcacta
ctgcctcagtttgatggccgtcgggaggacatggcttccgtcctggagatgtctgtgtgt
ttcctccagcttgcccacagcatggatcctagctgggagcagctctctgttcctcagcct
cctcaagagatgtggcacatgtggcagggcgatgttctgcaggtaacccttgcgaatcag
attgcagacagcaagccagactccgggatagcaaaagcatctgccgtggctcgggtgcag
gaccccccatgctgtggcatgctggatacagaccagagccaagctactgagagggcgtcg
gagcttctggagaggccttcctcctgccctgagtcctccagcttgggtgctgggctccca
ccctggcctcctcactcatggcagccagccactcccgaggcgagtgacgctgtttctggt
ggatcacagcaggtgggatccctggccggggacactgagtctccgggcatgctggctgag
gaggccaacttggtcttggcatctgtgcctgatgccaggtacaccacaggggcagggtcc
gaagtggtggacggagcatcctttctgctgaccaccaatcctgattggtggttggggtca
gtggagggcagaggaggaccagctcttgccaggaacagcccagtggatggggcagagcca
atctacattggagaccctgagccctgctcccaggagctccaggctggccccgtagagctg
tggggcttggattttggcagccctggcctggccctgaaggatgaagcagacagcatcttc
cctgactttttcccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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