KEGG   Rattus norvegicus (rat): 362178
Entry
362178            CDS       T01003                                 
Symbol
Cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
  KO
K14408  cleavage stimulation factor subunit 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    362178 (Cstf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    362178 (Cstf3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     362178 (Cstf3)
SSDB
Motif
Pfam: Suf TPR_14 NRDE-2 TPR_19 TPR_6 TPR_16
Other DBs
NCBI-GeneID: 362178
NCBI-ProteinID: NP_001071140
RGD: 1305901
Ensembl: ENSRNOG00000012089
UniProt: A0JPN7
Position
3:111421291..111492539
AA seq 590 aa
MSGDAAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKVCTQQQDGRSVPLPLRFQESMHCTVFILRSILYSVATKTKIFH
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcaggagacgcagccgcggagcaggcagctgaatatgtcccagagaaggtgaagaaa
gcggaaaagaaattagaagaaaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttacgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcaaagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatacgtcagagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcttatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgtaggatcttatgca
gaaaatcagagaataactgctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactctggagagactacaacaagtatgaagagggtatcaatattcat
ttagctaaaaagatgattgaagatcgaagtagagactacatgaatgctagacgtgtagca
aaggaatacgagacagtgatgaaaggtttggaccgcaatgccccttcagtgccccctcag
aatacccctcaagaagctcagcaagtagacatgtggaagaagtacatccagtgggagaag
agcaaccccctgcgtaccgaggaccagaccctcataacaaagcgagttatgtttgcctat
gaacagtgcctacttgtgctgggccatcaccctgatatctggtatgaagctgcccagtat
ctggaacagtcgagtaagctgctcgcagaaaagggggatatgaacaatgccaaattattt
agtgatgaagctgctaatatatatgaacgagccatcagcactttattaaagaagaacatg
ctcctttactttgcatatgcagattatgaagagagtcgcatgaagtacgagaaagttcac
agtatatataacagactgctggcaattgaggacattgaccccaccttggtatatatccaa
tatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaag
gcaagagaggatgcgagaacccgtcatcacgtctatgtgaccgcagcgctcatggagtat
tactgcagtaaggacaaatctgttgcctttaagatttttgaattgggactaaagaaatat
ggagatattccagagtatgttttggcttatattgactatctctctcacctcaatgaggac
aataacacccgagttctgtttgaaagagtcttgacgtctggaagccttcctcccgagaag
tccggagaaatctgggctcggtttctagcttttgaaagcaacattggtgatttagctagt
attctcaaagtggagaaaagacgctttacagcgttcagagaagagtatgaaggcaaagaa
acagctttattggtagacagatacaagtttatggatttatacccttgttctgcaagtgaa
ctcaaagcactgggctacaaggtatgtactcagcagcaagatggccgcagtgttcccctt
cccctacggtttcaggagtccatgcactgcacagttttcattctacggtcaattctttac
tctgttgctactaagacaaaaatatttcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system