KEGG   Rattus norvegicus (rat): 362219
Entry
362219            CDS       T01003                                 
Symbol
Gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
  KO
K18695  glycerophosphocholine phosphodiesterase GPCPD1 [EC:3.1.4.2]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00564  Glycerophospholipid metabolism
rno05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09103 Lipid metabolism
   00564 Glycerophospholipid metabolism
    362219 (Gpcpd1)
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    362219 (Gpcpd1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.2  glycerophosphocholine phosphodiesterase
     362219 (Gpcpd1)
SSDB
Motif
Pfam: GDPD CBM_20 PI-PLC-X
Other DBs
NCBI-GeneID: 362219
NCBI-ProteinID: NP_942074
RGD: 735140
Ensembl: ENSRNOG00000053201
UniProt: Q80VJ4 A6HQG6
Position
3:complement(140240574..140285469)
AA seq 672 aa
MTPSQVTFEIRGTLLPGEVFAMCGNCDALGNWSPQNAVPLTESETGESVWKAVIVLSRGM
SVKYRYFRGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETL
DSGWLTCQTEIRLRLHFSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDDDKASPTVLH
KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE
HVVQGDVLPGHVGTACLLSSTIAESERSAGILTLPIMSRSSRKTIGKVRVDFIIIKPLPG
YSCSMQSSFSKYWKPRIPLDVGHRGAGNSTTTAKLAKVQENTIASLRNAASHGAAFVEFD
VHLSKDLVPVVYHDLTCCLTMKRKYEADPVELFEIPVKELTFDQLQLLKLSHVTALKTKD
QKQCMAEEENSFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMN
AFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRS
RTTPIAMSFAQFENILGINAHTEDLLRNPSYVQEAKDKGLVIFCWGDDTNDPENRRKLKE
FGVNGLIYDRIYDWMPEQPNIFQVEQLERLKRELPELKNCLCPTVSHFIPPSFCMESKIH
VDANGIDNVENA
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgacaccttctcaggtcacctttgaaataagaggaactcttttaccaggagaggtcttt
gcaatgtgtggaaactgtgatgccttgggaaactggagtcctcaaaatgctgtgcctctt
actgagagtgagacaggcgaaagtgtatggaaagcagtgattgttcttagtagaggaatg
tccgtgaagtaccgctacttcagaggctgctttttagaaccaaagactatcggtggtcca
tgtcaagtcatagttcacaagtgggagactcatctacaaccacgatcaataaccccttta
gaaaacgaaatcattattgacgatggacaatttggaatccacaatggtgttgaaacactg
gattctggatggcttacctgtcagactgaaataagactgcgtctgcatttttctgagaaa
cctcctgtttcaattaccaagaaaaagttcaaaaaatctagatttagggtaaagcttaca
ctagagggtctggaggaagatgatgacgacgatgataaggcatctcccactgttcttcac
aagatgtccaatagcctggagatatccttaataagtgacaatgagttcaagtgcaggcac
tcacagccagaatgtgggtatggcttacagcctgaccgctggacagagtacagcatacag
acaatggagccggacaaccttgaactcatctttgacttttttgaggaagatctcagtgag
catgtagtccagggtgatgttcttcctggacatgtgggcacagcatgcctcctgtcatct
accattgctgagagtgagagaagcgctggaatccttactcttcccatcatgagcagaagt
tccagaaaaactataggcaaagtcagagttgattttatcatcatcaagccattaccagga
tatagttgttctatgcagtcttcattctccaagtattggaaaccaagaataccactggat
gttggacatcgtggtgcagggaactcaacaacaactgccaagctggctaaagtacaggaa
aatactattgcttctttaagaaatgctgccagccatggtgcagcatttgtggaatttgat
gtccacctttcaaaggacttagtgcctgtagtgtatcatgatctcacctgctgtttaact
atgaaaaggaaatatgaagctgatccagttgaattgtttgaaatcccagtaaaggaatta
acattcgaccaactccagttattgaagctttctcatgtgactgcactaaaaaccaaagac
cagaaacaatgtatggctgaggaggaaaattccttttctgaaaaccaaccatttccttct
cttaagatggttttagagtcattgccagaaaatgtaggatttaatatagaaataaaatgg
atttgccaacacagggatggagtatgggacggcaacttatcgacatattttgatatgaat
gcatttttggatataattttaaaaactgttttagaaaattccgggaagaggagaatagta
ttttcttcatttgatgcagacatctgtacaatggttcggcagaaacaaaacaaatatccc
atattatttttgacccaaggaaagtctgacatttaccctgaactcatggacctcagatct
cggacaacacccattgcaatgagctttgcacagtttgaaaatattttggggataaatgcc
catactgaagatctccttagaaacccatcctatgtccaagaggcaaaagataagggattg
gtcatattctgctggggtgatgataccaatgatcctgaaaacagaaggaaactgaaggaa
tttggagtaaatggtctaatatatgataggatatacgattggatgcctgaacaaccaaat
atattccaagtggagcaactggagcgcctgaagcgagaattgccagagcttaagaactgt
ttgtgtcccactgttagccacttcattcctccttctttctgtatggagtctaaaatccat
gtggatgctaacggcattgataatgtggagaacgcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (17)   
   RefSeq(nuc) (5)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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