KEGG   Rattus norvegicus (rat): 362242
Entry
362242            CDS       T01003                                 
Symbol
Snta1
Name
(RefSeq) alpha-1-syntrophin
  KO
K24063  alpha-syntrophin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    362242 (Snta1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    362242 (Snta1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    362242 (Snta1)
   05414 Dilated cardiomyopathy
    362242 (Snta1)
   05416 Viral myocarditis
    362242 (Snta1)
SSDB
Motif
Pfam: PH_17 PDZ PH PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 362242
NCBI-ProteinID: NP_001094371
RGD: 1307068
Ensembl: ENSRNOG00000016062
UniProt: B5DFL0
Position
3:complement(163336509..163366954)
AA seq 499 aa
MASGRRAPRTGLLELRSGAGSGAGGERWQRVLLTLAEDALTVSPADGEPGPEPEPAQLNG
AAEPGAASPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQT
EALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVSPYFKNSAGGTSVG
WDSPPASPLQRQPSSPGPQPRNLNEAKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDT
LFLRAKDEASARSWAGAIQAQISTFIPWVKDELQALLTATGTAGSQDIKQIGWLTEQLPS
GGTAPTLALLTEKELLLYCSLPQTREALSRPARTAPLIATRLVHSGPSKGSVPYDAELSF
ALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRPCNLSVH
IDKGFTLWAAEPGATRAVLLRQPFEKLQMSSDDGMSLLFLDFGGAEGEIQLDLHSCPKTM
VFIIHSFLSAKVTRLGLLA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggcgtcaggcaggcgcgctccgcgcaccgggttgctagaactgcgctccggggcgggc
tccggggcgggtggtgagcggtggcagcgggtgttgctcactctggcggaggacgcgctg
accgtgagccccgccgacggcgagcccggcccggagcccgagcccgcgcagctcaacggc
gccgctgagcccggcgcggcgtccccacagctgccagaggcgctgctgctccagcggcgc
cgcgtgacggtgcgcaaggccgacgccggcgggctcggcatcagcatcaagggaggccgg
gaaaacaagatgcctattctcatttccaagatcttcaaggggctggcagcagaccagacg
gaggccctctttgtcggcgatgccatcctctctgtgaatggtgaagatttgtcctctgcc
acccatgatgaagcagtacaggccctcaagaagacgggcaaggaggttgtgttggaggtt
aagtatatgaaggaggtctcaccgtatttcaagaattctgctggtgggacctccgttggc
tgggactcacctcctgcctcgcctcttcagcgtcagccttcttcccctggcccccaaccc
cggaacctcaatgaggccaaacatgtatctttgaagatggcgtatgtctcaaggaggtgt
acccccactgacccggagcccaggtatctggagatctgtgcagcagatggccaggacact
ctcttcttgagggccaaggatgaggccagtgcaaggtcatgggcaggtgccatccaagct
cagatcagcacatttataccttgggtcaaggatgagctgcaggcgctgctgacagccaca
ggtacagctgggagccaggacatcaagcagattggctggctcacggaacagttgcccagt
gggggtacagcaccaaccctggccctgctgactgagaaggagctgctcctctactgctct
ctcccccagactcgagaggccctgagcaggccggcccgcactgccccgctcattgccacc
aggctggtgcactcaggcccttccaagggctcagtgccctatgatgcagagctctccttt
gccctgcgcacgggtacacgccacggtgtggacactcacctgttcagtgtggagtcgccg
caggagctggcagcctggacccgacagttggtggatggctgtcaccgggctgctgaaggt
gtgcaagaagtgtctacagcctgcacgtggaatggccgtccctgcaacctatccgtgcac
attgacaagggcttcacactgtgggcagctgagccaggagcaacccgagctgtgctgctc
cgacagccctttgagaaacttcagatgtcatcagatgatggcatgagtctccttttcctg
gactttgggggtgctgaaggagagatccagctggacctgcattcgtgtcccaaaaccatg
gtctttatcatccactctttcctgtctgccaaggtcacccgcttggggctcttggcctag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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