KEGG   Rattus norvegicus (rat): 362245
Entry
362245            CDS       T01003                                 
Symbol
Map1lc3a
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3A
  KO
K10435  microtubule-associated protein 1 light chain
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04216  Ferroptosis
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    362245 (Map1lc3a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    362245 (Map1lc3a)
   04137 Mitophagy - animal
    362245 (Map1lc3a)
  09143 Cell growth and death
   04216 Ferroptosis
    362245 (Map1lc3a)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    362245 (Map1lc3a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    362245 (Map1lc3a)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    362245 (Map1lc3a)
   05022 Pathways of neurodegeneration - multiple diseases
    362245 (Map1lc3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    362245 (Map1lc3a)
   03029 Mitochondrial biogenesis [BR:rno03029]
    362245 (Map1lc3a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    362245 (Map1lc3a)
Membrane trafficking [BR:rno04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    362245 (Map1lc3a)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    362245 (Map1lc3a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     362245 (Map1lc3a)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 362245
NCBI-ProteinID: NP_955794
RGD: 735183
Ensembl: ENSRNOG00000025443
UniProt: Q6XVN8 A6KI25
Position
3:164243204..164244850
AA seq 121 aa
MPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG
F
NT seq 366 nt   +upstreamnt  +downstreamnt
atgccctccgaccggcctttcaagcagcggcgcagcttcgccgaccgctgtaaggaggtg
cagcagatccgtgaccagcaccccagcaagatcccggtgatcatcgagcgctacaagggt
gagaagcagctgcctgtcctggataagaccaagtttctggtcccagaccatgttaacatg
agcgagttggtcaagatcatccggcgccgcctgcaactcaaccccacgcaggccttcttc
ctgctggtgaaccagcacagcatggtgagtgtatccacacccatcgctgacatctatgaa
caggagaaggatgaagacggattcctctacatggtctatgcctcccaagaaaccttcggc
ttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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