KEGG   Rattus norvegicus (rat): 362247
Entry
362247            CDS       T01003                                 
Symbol
Trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein
  KO
K11796  Trpc4-associated protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    362247 (Trpc4ap)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    362247 (Trpc4ap)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     362247 (Trpc4ap)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     362247 (Trpc4ap)
SSDB
Motif
Pfam: DUF3689 Carm_PH
Other DBs
NCBI-GeneID: 362247
NCBI-ProteinID: NP_001094218
RGD: 1309914
Ensembl: ENSRNOG00000019152
UniProt: A6KI52 F7FBB0
Position
3:complement(164582146..164653123)
AA seq 797 aa
MAAAPAAAGAGASRGRRSAATAAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
FLTERDKLSKWSGIPQLLLKLYATSHLHSDFVECQSILKEISPLLSMEAMAFVTEDRKFT
QEATYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEDSEHSQASTVFPPLGT
SEESGLPHNSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
SYIEEPYMDIDRDFTEE
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggcggcagcgcccgcagcggctggagctggggccagccgggggaggcggtcggccgct
accgcggcggcgtggggcggctggggaggtcggccgcgaccgggtaacatcctgctgcag
ctgcggcagggccagctcaccggccgaggcctggtccgagcggtgcagttcactgagacc
tttttgaccgagagggacaaattgtccaaatggagtggaattcctcagttgctccttaag
ctgtatgccaccagccatctgcacagtgacttcgttgagtgccaaagcattctcaaggag
atttctcctcttctctctatggaggctatggcgtttgtgactgaagacaggaaatttact
caagaagctacatatccaaatacatatatttttgacttatttggaggcgttgatcttctt
gtagaaattcttatgaggcctaccatctctatccggggacagaaactgaaaataagtgat
gagatgtcgaaggactgcttgagcatcctgtacaatacctgtgtctgtacggaaggagta
acaaagcgtttggcagaaaagaatgattttgtgatttttctgttcacactgatgacaagt
aagaagacgttcttacaaacagcaactctcattgaagacattttgggtgttaagaaggaa
atgattcggctagatgaagttcccaatctgagttccttagtatccaattttgatcagcag
cagcttgctaacttctgcaggatcctggctgtcaccatttcagagatggacacagggaat
gacgacaaacacacgcttcttgccaaaaacgctcagcagaagaagagcttgagtttgggg
ccttctgcagctgaaatcaaccaagctgctcttctcagcatccctggctttgtggaacgg
ctttgcaaactggcaactagaaaagtgtcagagtcaacgggcacagccagcttccttcag
gagctggaggagtggtacacgtggctggacaatgcgctggtgctggacgccctgatgcga
gtggccaatgaggattctgagcacagtcaagcctccactgtgttccctcctctaggcact
tcggaggagagcgggctgccgcataactcagccaggacgcagctgccgcagtcgatgaag
atcatgcatgagattatgtacaaactggaggtgctctatgtcctctgtgtgctgctcatg
gggcgtcagcgaaaccaggtccacaggatgattgctgagttcaagttgatcccaggactc
aacaatttgttcgacaaactgatttggaggaagcattcagcatctgctcttgtcctccat
ggtcacaaccagaactgtgactgtagcccggatatcaccttgaagatccagtttttgaga
cttctccagagtttcagtgaccaccatgagaacaagtacctgctgctcaacaaccaggag
ctaaatgaactcagtgccatctctctgaaagccaacatccctgaggtggaagccgtcctc
aacactgacaggagtctggtgtgtgacggcaagaggggcttactaactcggctgctgcag
gtcatgaagaaggagccagcagagtcttcattcaggttttggcaagcccgggctgtggaa
agttttctccgagggactacgtcctatgcagaccagatgttcctgctgaagcgaggcctt
ctggagcacatcttatactgcattgtggacagcgaatgcaagtcgagggatgtactccag
agctactttgacctcctgggagagctgatgaagttcaacgttgatgcattcaagagattc
aataaatatatcaacactgatgcaaagttccaggtgttcctgaaacagatcaacagctcg
ctagtggattctaacatgctggtgcgctgtgtcactctgtcgctggaccgatttgaaaac
caggtggacatgaaagtggccgaggtcctgtccgagtgccgcctgctcgcctacatatcc
caggtgcccacgcagatgtccttcctcttccgcctcatcaatatcatccatgtacagaca
ctaacccaggagaacgtcagctgcctcaacaccagcctggtgatcctgatgctagcccgt
cggaaagagcggttgcccctgtacctgcggctgctacagcggatggagcacagcaagaag
taccctggcttcctgctcaacaacttccacaacctgctgcgcttttggcagcagcattac
ctgcacaaggacaaggacagcacctgcctggagaatagctcctgcatcagcttctcatac
tggaaggagaccgtgtccatcttgttgaacccagaccgccagtcgccctccgccctggtc
agctacattgaagagccctacatggacatagacagagacttcactgaggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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