KEGG   Rattus norvegicus (rat): 362274
Entry
362274            CDS       T01003                                 
Symbol
Ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    362274 (Ddx27)
   03009 Ribosome biogenesis [BR:rno03009]
    362274 (Ddx27)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     362274 (Ddx27)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    362274 (Ddx27)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    362274 (Ddx27)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_22 PRK
Other DBs
NCBI-GeneID: 362274
NCBI-ProteinID: NP_001129273
RGD: 1305634
Ensembl: ENSRNOG00000008081
UniProt: B1H269
Position
3:176163220..176182418
AA seq 761 aa
MLAELGFIGTIGENDEVPVEPESDSGDEEEEGPIVLGLKQKALQKNRSADFNPDFVFTEK
QGTYDGSWALADVMSQLKKKRAATTLDEKIEKVRKKRKAEDKEAKSGKAEEKEGQEGSDL
KGQENLGENEAGSKDEESETDYSSEDEEILTKADTLKVKEKKKKKKGQESGGFFEDASEY
DKSLTFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL
PVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEA
ALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSH
HRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIV
AALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQI
DILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKM
LKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEREVQQSEAQIDTAQ
RLLSKGKQTADQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDVKKKGEM
TAEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPAAGPAKKQKQHKKSVFDEELTN
TSKKALKQYRAGPSFEERKQLGLPRQRRGNFKSKSRYKRKK
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgctggcggagctcggtttcatcgggaccatcggcgaaaatgacgaggtgccggttgaa
cccgagtcggattccggagacgaggaggaggagggacccattgtgctgggcctcaagcag
aaagccctgcagaagaaccgcagtgctgacttcaaccctgactttgttttcactgagaag
cagggcacgtatgatggtagctgggccctggctgacgtcatgagccagctcaagaagaag
agggcagccactaccctggatgagaagattgagaaagtacggaagaaaaggaaagcagag
gataaggaagccaagtctgggaaggcagaggagaaagaaggccaggagggctctgacctg
aaggggcaggagaatctaggagagaatgaggcaggctccaaggacgaagagtctgagact
gactactcctctgaggatgaggagatcctcaccaaagcagacacactcaaagtgaaggag
aagaagaagaagaagaagggccaggaatcaggaggattctttgaagatgcatctgaatat
gacaaaagcctgaccttccaggacatgaacctctcccggcccctcctgaaggccattaca
gccatgggcttcaagcagcccactccaattcagaaggcatgcattcctgtgggtctgctg
gggaaagacatctgcgcctgcgcagctactgggacaggcaaaacggcagcctttgcactg
ccagtcttagagcgtctgatctacaagccccgtcaggctgcggtcactcgagtgctggtg
ctggtccccaccagagagctgggcatccaagtgcactctgtcaccaagcagctggcccag
ttctgcagcatcactacctgcctggctgtggggggcctggatgtgaagtctcaggaagcc
gctcttcgggcagcaccagacatcctcattgccactcctggccggctcatcgaccacctc
cacaactgcccttccttccacctgagcagcattgaagtgctcatcttggacgaggctgac
aggatgctggatgagtattttgaggagcagatgaaggagattatccgaatgtgttcccac
caccgccagaccatgctcttctcggccaccatgacagatgaggtgaaagatctggcttcg
gtctccttaaagaatcctgtgcggatatttgtgaacagcaacacagatgtagctcccttc
ctacggcaagagttcatccggatccggcctaacagggaaggggaccgggaagccattgtg
gcagctctactgatgagaacctttactgaccacgtgatgctgttcacccagaccaagaag
caggcccatcgcatgcacatcctcctagggctgctggggctgcaggtgggcgagctccat
ggtaacttgtcacagacgcagcggctggaagctctccggcgctttaaggatgaacagatt
gacatcctggtagccacagatgtggcagcccgtgggcttgacattgaaggagtgaaaaca
gtgatcaacttcaccatgcccaacactgtcaaacactatgtgcaccgggtggggcgaact
gcacgtgctggcagggctgggcgctctgtctctctggtgggagaagaggagcggaagatg
ctgaaggagatcgtaaaggctgccaaggctccagtgaaggctcggatccttccccaggat
gttatcctcaaattccgggacaagattgagaaaatggagaaagatgtgtatgcagtgctg
cagctggaggcggaggagagagaggtgcagcagtcagaagcccagatcgacacagcacag
cgactcttatccaaagggaaacagacagcagaccaggaacctgagaggagctggtttcag
accaaagaagagaggaaaaaggagaagattgccaaggctctgcaggagtttgacttggcc
ttaagaggaaagaagaaaaggaagaagtttatgaaggacgtcaagaaaaagggggagatg
acggcggaggagaggtcccagtttgaaatcctcaaggcacagatgtttgcagagcggctg
gccaagaggaaccgcagaaccaagcgagcacgggcaatgcctgaggaagagcctgcagca
ggccctgccaagaagcagaagcagcacaagaagtctgtgtttgatgaagaactcaccaac
acaagcaagaaggccctgaaacagtaccgggctggcccttcctttgaagagaggaaacag
ttaggtctgccccgccagaggagagggaacttcaagtctaagtccaggtacaagagaaag
aagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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