KEGG   Rattus norvegicus (rat): 362279
Entry
362279            CDS       T01003                                 
Symbol
Pard6b
Name
(RefSeq) partitioning defective 6 homolog beta
  KO
K06093  partitioning defective protein 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04015  Rap1 signaling pathway
rno04144  Endocytosis
rno04360  Axon guidance
rno04390  Hippo signaling pathway
rno04530  Tight junction
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    362279 (Pard6b)
   04390 Hippo signaling pathway
    362279 (Pard6b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    362279 (Pard6b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    362279 (Pard6b)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    362279 (Pard6b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    362279 (Pard6b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362279 (Pard6b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     362279 (Pard6b)
SSDB
Motif
Pfam: PB1 PDZ PDZ_6
Other DBs
NCBI-GeneID: 362279
NCBI-ProteinID: NP_001102079
RGD: 1308205
Ensembl: ENSRNOG00000010883
UniProt: A6JXM9
Position
3:177209429..177230509
AA seq 372 aa
MNRGHRHGVSSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
GYADIHGDLLPINNDDNYHKAVSTANPLLRVFIQKKEEADYSAFGTDTLIRKKNVLSNVL
RPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVR
VTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSR
NLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQAGASLEPEDQDSDEDDIIIEG
SGEPQQIPKATPEALSLESLTQIELSFESGQNGFSPLQDTSLVAVPSSLDTESESRAPDQ
KLLEEDGTIITL
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaaccgtggccacaggcacggggtgagcagcggctgcctgggcaccatggaggtgaag
agcaagttcggagctgagtttcggcggttttctctggaaagatccaagcccggaaagttt
gaggagttttatggactgctgcaacacgttcacaagatccccaacgttgacgtgctagtg
ggctacgcagacatccacggggacttgctgcccataaacaatgatgacaactaccacaag
gccgtttccactgccaacccactgctcagggtctttatacagaagaaggaagaagccgac
tacagcgcctttggcacggacaccctgatcaggaagaagaacgtgctgagcaacgtgctg
cgccccgacaaccacaggaagaagccgcacatcgtcatcagcatgccgcaggacttccgg
cccgtgtcatccatcatcgatgtggacatcctcccggagacgcaccgcagggtccgtctg
tacaagtacggcacagagaagcccctgggcttctacatccgggacggctccagcgtccgt
gtgacgccgcatggtttagagaaagttcccgggatcttcatctccaggctcgtccccggg
ggcctggcccagagcacgggcctgctggctgtcaatgacgaagttctagaagtaaatggt
atagaagtgtcaggcaagagcctggaccaggtgactgacatgatgatagccaacagccgt
aacctcatcatcacggtgcggccggccaaccagaggaacaacgtggtgcgtaacagtcgg
acttccggcagctccggccagtccaccgacaacagcctcctgggctacccacagcaggca
ggggccagcttggagccagaggaccaggacagcgatgaggacgacattatcattgaaggc
agtggtgagccgcagcagatcccgaaggccacccccgaggccctgagcctggagtccctg
acgcagatcgagctcagcttcgagtcggggcagaatgggttctcccctctccaggacacg
agcctggtggctgtccccagcagcctggacaccgagtcggaaagccgagctccggatcag
aaactcttagaggaagacggaacaatcataacgttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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