KEGG   Rattus norvegicus (rat): 362281
Entry
362281            CDS       T01003                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
rno05164  Influenza A
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    362281 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    362281 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    362281 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    362281 (Rae1)
   03036 Chromosome and associated proteins [BR:rno03036]
    362281 (Rae1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     362281 (Rae1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    362281 (Rae1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 PepSY
Other DBs
NCBI-GeneID: 362281
NCBI-ProteinID: NP_001028880
RGD: 1311540
Ensembl: ENSRNOG00000021295
UniProt: Q3SWS8 A6KKY5
Position
3:182197432..182212381
AA seq 368 aa
MSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPVAACGFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggaacaacctctggttttgggactggtgggaccagcatgtttgggagc
acaaccacagataaccataacccaatgaaggatattgaagtaacgtcttctcctgatgac
agcatcggttgtctgtctttcagcccaccaaccttaccagggaacttccttattgcagga
tcgtgggctaatgatgttcgctgctgggaagtgcaagacagcgggcaaaccattccaaag
gcccagcaaatgcataccgggccagtgcttgatgtctgctggagtgacgatgggagcaaa
gtgttcacagcatcgtgtgacaagacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcacgatgctcccgttaagaccatacattggatcaaagccccaaac
tacagctgcgtgatgaccgggagctgggataagaccctgaagttttgggatacccggtcg
tcaaatcctatgatggtcctgcagctccctgagcgctgttactgtgcagatgtgatctat
ccgatggctgtggtggccactgcagaaaggggcctgattgtgtaccagttggagaaccag
ccctctgagttcaggaggatagagtctccactgaagcaccagcatcggtgtgtggctatc
tttaaagacaaacagaacaagccaacgggttttgctcttgggagtattgaggggagagtg
gccattcactacatcaaccctccaaatccggccaaagataacttcaccttcaaatgccat
cgatccaacggtaccaacacttctgctcctcaagacatctatgcagtgaacggcatcgcc
ttccaccctgtccatggcaccctggccactgtggggtccgacggccggttcagcttctgg
gacaaagatgccaggacaaagctgaagacctcagagcagctggaccagcccgtggcagcg
tgtggcttcaaccacaacgggaacatatttgcctatgcctccagctacgactggtccaag
gggcatgagttttataatccccaaaagaaaaattacattttcctgcgtaatgcagctgaa
gagctaaagccaagaaataaaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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