KEGG   Rattus norvegicus (rat): 362285
Entry
362285            CDS       T01003                                 
Symbol
Col9a3
Name
(RefSeq) collagen alpha-3(IX) chain precursor
  KO
K08131  collagen type IX alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno04820  Cytoskeleton in muscle cells
rno04974  Protein digestion and absorption
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    362285 (Col9a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    362285 (Col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    362285 (Col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    362285 (Col9a3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    362285 (Col9a3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    362285 (Col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    362285 (Col9a3)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   362285 (Col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 362285
NCBI-ProteinID: NP_001102081
RGD: 1310255
Ensembl: ENSRNOG00000009531
Position
3:188089337..188112034
AA seq 680 aa
MTGAPALALLLLGQLLTATSAQKVGPRGPPGPQGPPGKPGKDGIDGEAGPPGLPGPPGPK
GTSGKPGKPGEAGLPGLPGVDGLTGRDGPAGPKGAPGERGSLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGNPGVLPEGATDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEQGEVGKDGEKGNPGPPGPPGIPGTVGLQGPRGLQGLPGPLGPPG
DRGPIGFRGPPGIPGAPGKAGDRGDRGPEGFRGPKGDLGRPGPKGIPGVAGPGGEPGMPG
KDGKDGVPGLDGEKGEAGRTGAPGEKGPNGLPGLPGRAGSKGEKGEVGRTGELGEAGPSG
EPGIPGDVGVPGERGEAGHRGSVGALGPQGPPGAPGIRGFQGQKGSIGDPGLPGPQGLRG
DVGDRGPGGATGPKGDQGIAGSDGLPGDKGELGPNGPVGQKGESGSRGELGPKGIQGPNG
TSGVQGVPGPPGPLGFQGVQGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHL
RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDK
GAIGVGLDGPAGDQGYRGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAAGAQGTPGICDT
SACQGAVLGGGGEKSGPRSS
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgaccggagcgcctgccctagccctgctgctgctggggcagctcctgacggccacctcc
gcgcagaaagtgggacctcgaggcccccctggtccccaagggcctcctggaaaacccggc
aaggatggcatcgatggagaagctggccctccaggtctgcctggccctccaggacccaaa
gggacctcagggaagccggggaagccgggagaggcaggactgccaggactgcctggtgta
gatggtctgacagggagagatggacccgcaggacccaaaggtgccccgggagaacgggga
agtctaggacctccagggccaccaggacttggaggcaaaggcctccctggacctcctgga
gaggcaggagtgagtggcctcccaggtgggattggtctacgtggccccccgggaccctct
ggacttccaggcctgcctggccccccaggacctcctggacctcctggaaaccctggagtc
ctccctgaaggtgctactgatctgcagtgtcctgccatctgccctccaggccctccaggg
cccccaggaatgccggggttcaaggggcctactggctacaaaggggaacaaggagaagtc
ggcaaagatggtgagaagggtaatcctggcccccctggacctccaggaatcccaggcact
gtggggctacagggcccaagaggattgcaaggacttccagggccacttggaccccctggg
gaccggggtcccattgggtttcggggccccccagggatcccaggagcacctgggaaagcg
ggtgacaggggtgataggggaccagaagggttccgtggccctaagggtgacctgggcagg
cctggtcccaaaggaatccctggagtggctgggccaggcggagaaccaggcatgccaggc
aaggatggcaaggacggtgtgccgggacttgacggtgagaagggagaggctggtcgcact
ggtgccccaggagaaaaaggccccaatgggctgccggggctccctggacgagcagggtcc
aaaggcgagaagggagaagtgggtagaactggggagctgggcgaggctggcccctctgga
gaaccaggtattcctggagacgttggtgttccgggggagcgtggcgaggctggtcacagg
ggctcagtgggggccctcggcccacaaggtcctcctggggctcctggcattcgtggcttc
cagggccaaaaaggcagcataggagaccctggccttccaggcccccaaggcctacgggga
gatgtgggtgaccggggtccaggaggtgccacaggtcctaagggagaccagggcatcgcg
ggttctgatggtcttccaggggacaaaggagagctgggtcctaatggccccgttggacaa
aaaggagagtccggcagccgaggggaactgggccccaaaggcatccagggccccaatggt
accagtggggtccagggtgtgcctggtcccccaggtccactgggcttccaaggcgtgcag
ggtgtcccaggcatcacggggaaacctggagttccgggcaaggaagccagtgaacaacgc
atcagggagctgtgtggggggatgatcagtgagcaaattgcacagctggctgcacacctg
aggaagcccttagcaccaggctccattggcaggcctggtccagctggccccccaggccct
ccaggccccccaggctccattggccaccctggcgctcggggtcctcctggataccgtggt
cccactggggaactaggagatcctggaccaagaggaagccagggtgacagaggagacaag
ggagcaataggtgtagggttggatggacctgctggggaccagggctaccgagggcctcaa
ggtgtgcctggcatcagcaaagatggtcgagatggtgctcatggtgagcctggccttcct
ggtgatcctggccttcctggagctgctggtgctcaaggaaccccggggatttgcgacacc
tcagcctgccaaggagctgtgttagggggaggtggggaaaagtcaggtcctcggagctca
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system