KEGG   Rattus norvegicus (rat): 362288
Entry
362288            CDS       T01003                                 
Symbol
Rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
  KO
K11136  regulator of telomere elongation helicase 1 [EC:5.6.2.3]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    362288 (Rtel1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     362288 (Rtel1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    362288 (Rtel1)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 ResIII DEAD CCM2_C USH1C_N
Other DBs
NCBI-GeneID: 362288
NCBI-ProteinID: NP_001178786
RGD: 1306721
Ensembl: ENSRNOG00000027513
UniProt: Q5RJZ1
Position
3:188778329..188842877
AA seq 1274 aa
MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR
EHLRDAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLT
QVIGELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVASRSCHFYNNVEE
KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLDAKSRKAHNI
DLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEVINQVLEEQARVAQHGELQQEFI
IDTSSSGLNMELEDIAKLKMILLHLEEAIDAVQLPGDDRGVTKPGSYIFELFAEAQITFQ
TKGCILESLDQIIQHLTGRTGVFTNTAGLQKLMDIIQIVFSVDPLEGSPGSQVGLGSSHF
YKVHIHPETSHRRAAQRSDAWSTTASRKQGKVLSYWCFSPSHSMRELVQQGVRTLILTSG
TLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSS
LGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWQAQGMSKKVEALKPLFVEPRNKGSFSE
VIDAYYQQVASPGSNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVILKM
QFLDEMKGRSRVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADA
RAHLPSWVRPYLKVYDNFGRVIRDVAQFFRVAQKAMPLPVPQAVTSSVSEGEAAVKEATL
SSHSLSTRKAMSLDVHVPSLRRRPVGLPTAGDSESSVCVEYEQQTFSAQKRPMGLLAALE
YNEQKAGASEEQALSSSTPSLRCEKRLSVEQRGGKKKVRLVNHPEEPVAGTQAGRAKMFM
VAVKQALSQANFDTFTQALQHYKSSDDFEALVASLTCLFAEDPKKHTLLKGFYQFVRPHH
KQQFEDICFQLTGQRCSYQPGNSLPFGEQAQSTASKQGRRELESKLTLSEGADRQLDPGE
HLNQGWPHLSTHLTSKGDTSNCPKVGCVGEKPGQPAVNDYLSDVHKALGSASCNQLTAAL
RAYKQDDDLDKVLAVVAALTTAKPEHLSLLQRFGMFIRRHHKPRFVQTCADLMGLPTIGK
GLELPCPRDESTTVPSELTHEDMKPGPSTSKKPEKTQSKISSFLRQRPDQSARSDDTIMQ
LPPRLPPEHTTSQWNFVCPACATEDTVLFQCPSCDFCRCRACWQRQLQASRLCPACGAVN
RKQSIAQVIWPKPQ
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgcccagggtagtcctgaatggtgtgacagtggatttccctttccagccctacccatgc
cagcaggaatatatgaccaaggtgctagaatgtctccagaagaaagtgaatggcatcctc
gagagccccactggcactgggaagacgctatgcctcctctgcactacattggcctggcgg
gaacatctccgagatgccgtttcttccctaaagattgctgagagagttcaaggggaactc
tttgccagtcggaccttgtcatcctggaggagtgctgctgatgccaatggagactcaata
gattgctacacagatatcccaaagatcatctatgcttctagaactcactcacagctaact
caggtcatcggtgagcttcggaatacttcctaccggcccaaggtgtgtgtgctgggctcc
cgggagcagctgtgtattcatcccgaagtgaagaagcaagagagtaaccacatgcagatc
agtttgtgccgtaagaaggtggcaagtcgctcctgtcatttctacaacaatgtggaagag
aaaagcctggagcaagagctggctacccccatcttggatattgaggaccttgtgaagaac
ggaagcaaacacaaagtgtgcccatactacctctctcgaaacctgaagcagcaagctgat
atcatctttatgccatacaattacttgttggatgctaagagtcgtaaggcacacaacatt
gacctgaagggaacggttgtaatctttgatgaagctcacaatgtggaaaagatatgtgag
gagtcagcctcctttgacttgactccccgagatgtggcttcaggactggaggttatcaac
caggttttggaggagcaagcccgggtggctcagcatggtgaactccaacaggagttcatt
atagacacgtccagctcaggtctcaacatggagctggaagacatcgcaaagttgaagatg
atcctgctgcacctggaggaggctattgatgctgttcagctgcctggggatgacagagga
gtcaccaaacctggaagctacatcttcgagctgtttgctgaagcacaaataacatttcaa
accaaaggctgcattttggagtcgctggaccagataatccagcacctgacaggacgcact
ggtgtgttcaccaacacggctgggttgcagaagctcatggacattatccagattgtgttc
agcgtggaccctctggaaggcagccctggttctcaggtggggctgggtagctcacatttc
tataaggtacacatacaccctgaaaccagccaccggagagcagctcagcggtcagatgcc
tggagtaccactgcatccaggaaacaagggaaggtgctgagctattggtgcttcagtccc
agccacagcatgcgtgaactggtccagcaaggagtccgtacccttatcctcaccagtggt
acactggctccgctgtcttcctttgctctggagatgcaaattccattcccagtctgtctg
gagaatccacacatcattgacaagaaccagctctgggtaggggttatccccagaggacct
gatggtgttcagctaagctctgcctatgacaaaaggttttctgaagagtgcttatcttcc
ctggggaaggctctgggcaacattgctcgtgtggtgccccatgggcttctggtcttcttc
ccttcctaccctgtcatggagaaaagcctggagttctggcaggcgcaaggcatgtccaaa
aaggtagaggcactgaagcctctattcgtggaacccaggaacaaaggcagcttctcagag
gtcattgatgcctactaccagcaagttgcctcccctgggtctaatggggccaccttctta
gcagtgtgtcgaggaaaggccagtgaagggctggacttctcagacatgaatggtcgtggt
gtgattgtcacgggcctcccatatcccccacgcatggatccccgtgttatcctcaagatg
cagttcttggatgagatgaaaggccggagtagggttggaggccagtgcctctctggacag
gaatggtaccagcaacaagcatccagggctgtgaaccaggctattgggagggttatccga
caccgccatgactatggggccatcttcttatgtgaccacaggtttgcctatgctgatgcc
agggcccatctgccctcctgggtgcgcccctacctcaaggtgtatgacaactttggccgt
gtcatccgagatgtggcccagttcttccgtgttgctcagaaagctatgcctttgccagtt
cctcaggctgtgacctcaagtgtgagtgagggagaagctgctgtcaaggaggccacattg
tccagccactccctctccaccaggaaagccatgagcttggatgtgcatgtgcccagcctg
aggcggaggcccgtaggattaccgactgctggagactccgagagcagcgtatgtgtggag
tatgagcagcagacattttctgcccagaagagacccatggggctgctagctgccttagag
tacaacgagcagaaggctggggcatctgaggagcaggcactcagctcctccaccccatct
ctccggtgtgaaaagaggctgtccgttgagcaaagaggaggaaagaagaaagtcaggctg
gtcaaccatccggaggaaccagtggctggcacacaggcaggcagagccaagatgttcatg
gtggccgtgaagcaagcactgagccaagctaactttgacacctttacccaggccctgcag
cactataagagttctgatgactttgaagccctagtggcctctctcacctgcctctttgct
gaagaccccaagaaacacaccctacttaaaggtttctaccagtttgtacgaccccaccac
aagcagcagtttgaggacatctgcttccagctaacaggccaacgatgtagctaccagcca
ggaaacagccttccctttggagagcaagcacagtcaactgccagtaagcaaggaaggaga
gagctggaatctaaactgaccttgtctgaaggtgcagataggcagctggatcctggagag
cacctgaatcaggggtggcctcacctgtctacccatctaacctccaaaggagacaccagc
aattgtccaaaagtgggatgtgtgggagaaaaacctggccagcctgctgtgaatgactac
ctatctgacgtccacaaagctctgggatctgcaagctgcaaccagcttacggcagctctg
agggcatacaaacaggatgatgacctggacaaagtgctggctgtggtggcagcattgacc
actgcaaaacctgaacacttatctttgctacagagatttggcatgtttatacgtcggcat
cataagcctcggtttgtacagacctgtgcagacctaatgggcctacctaccataggcaag
ggcttggagctcccatgtcccagggatgagagtacaactgtgccttctgagcttactcat
gaggacatgaaaccagggccctcgacgtccaagaaacctgagaagacccagagtaagatc
tcatccttccttagacagaggccagaccagagtgcgaggtctgatgataccataatgcag
cttcctcccagactaccccctgaacacacgacgtctcagtggaattttgtatgcccagcc
tgtgcaactgaggatacagtgcttttccagtgcccttcctgtgacttctgccgctgccgg
gcctgctggcaacgtcaactccaggcctctagactgtgtccagcttgtggtgctgttaac
aggaagcagagcattgcacaggtcatctggccgaagccccagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (21)   
   RefSeq(nuc) (17)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

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