KEGG   Rattus norvegicus (rat): 362353
Entry
362353            CDS       T01003                                 
Symbol
Tcaf1
Name
(RefSeq) TRPM8 channel-associated factor 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: Peptidase_M60 M60-like_N
Other DBs
NCBI-GeneID: 362353
NCBI-ProteinID: NP_001386277
RGD: 1565474
Ensembl: ENSRNOG00000017911
Position
4:complement(72589710..72639304)
AA seq 920 aa
MATPSATFEALMNGVTSWDIPDDSVPCELLLIGEASFPIMVNDVGQVLIAASSYGRGRMV
VASHEDFLVESQLFVFLVNAVGWLRSSSESTIGVHSSLAPLVKILESCGIESKIEPEVND
SLGVYCIDAYNETMTDKLLQFVKRGGGLLIGGQAWDWDNLGEDDRVLFSFPGNLVTSVAG
VYFTDNKADTNCYKVSKKMPKIPILVRCEDDLSEDRDELLHGISDLDITNSDCFPSQLLV
HGSLAFPLGLDTHHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRGK
IVVQTELRTLSGLLAVGGIDTSIEPQLTSDASVYCFEPTSDVGVKELQEFVAEGGGLFVG
TQAWWWAFKNPGVSPLARFPGNLLLNAFGISITSQSLNPGPFHIPKAGTRTYHFRSTLAE
FQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATRE
NPVINDCCRGAMLSLATGLAHSGSDLSLLIPEIEDVYSSCYLRPSESPITVDVNCTNPGT
RYCWMSTGLYIPGRQVIDVSLPEDAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCLD
KPMKSINCLWGGLLYIIVPQNSKLGTVPLTVKGAVRAPFYKLGETSKEEWKRRLLEYPGP
WGELATDNLILTVPTANLRTLENPEPLLRLWDEVMQAVAKLGGEPFPLRLPQRIVADVQI
SVGWMHAGYPIMCHLESVQELISEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCN
LWCVYVHETVLGIPRSRANIALWPPVREKRVRMYLSKGPNVKNWNAWTALETYLQLQEAF
GWEPFIRLFTEYRNQTTNSPTDNVNKMNLWVKMFSQQVQKNLAPFFEAWAWPIQKEVATS
LAYLPEWKENIMKLYLLTQL
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggcaactccatctgctacctttgaggcgcttatgaatggagtaacaagttgggatatc
cctgatgattccgttccatgtgaactgcttcttattggagaggcttcttttcctataatg
gtgaatgatgtaggccaggtcctcattgctgcctcttcctatggcagaggtcgcatggtg
gtagcatctcatgaggacttcttggtggaaagccagctctttgtctttcttgtcaatgct
gttggatggcttcgttcctcttctgagtcaaccattggtgtgcactcatctttagcacca
ttggtgaaaatcctcgagagctgtggaatagagtcaaagattgaaccagaagtgaatgac
tctctgggggtttactgcatcgatgcctacaatgaaaccatgacggataagctactccag
tttgtgaaacgtggcgggggcttgctcataggaggccaagcctgggattgggataacctg
ggtgaagatgatagagtactgttctcctttcctgggaatctggtgaccagtgtggctggt
gtgtacttcactgacaacaaagcggacacgaattgctataaagtctccaagaagatgcct
aagatacccatcttagttcgttgtgaagatgacctctcagaagacagagatgagcttcta
catggcatctcagacctggatatcaccaactcggactgcttcccatcccagctactagtg
catgggtctttggcttttcctttggggctagatacccaccatggctgtgtgatagctgct
gcccgctatggccggggacgggtggttgtaactggtcataaggtattattcactgtgggt
aaactcggcccctttctgctcaatgctgtccgctggctagatggcggccgcagaggcaag
attgtggtacagaccgagctgagaacactaagtggtctgcttgcagtagggggtatagac
accagcattgagccccaactgaccagtgacgcaagtgtctattgcttcgaacccacaagt
gatgtgggagttaaggaactacaggagtttgtagctgagggtggtgggctgtttgttgga
acccaagcctggtggtgggcttttaagaacccaggagtgtccccactggctcgattccca
ggaaacctgctcctcaatgcctttggtatcagcatcacaagccaaagcctcaatccagga
cctttccatatcccaaaagcaggaacaaggacctatcacttccgctctaccctggcagag
ttccaggtgataatgggcaggaaaagaggaaatgtggagaagggctggctagccaagctg
ggcccagatggggcagctttcctgcagattcctgcagaggagatccctgcttacatgtcc
gtgcacagactcctgcggaagctgctgagtcgctaccggcttccagtggcaaccagagag
aacccggtcatcaatgactgttgtaggggggccatgctttccctggccacaggtctggcc
cactctggaagtgacctctcactgctaatcccagaaattgaagatgtgtacagcagctgc
tacctacgcccctcagagtctcccatcaccgtggatgtcaactgcaccaatccaggcacc
cgatactgctggatgagcactggactctacatacctggaaggcaagtcatagatgtttcc
ttgcctgaagatgctgcctctgctgatctgaagatacaaattggctgtcacactgatgac
ctgaccagggccagcaagctcttccgaggcccccttgtgattaaccggtgttgcttggat
aaacccatgaaatcaatcaactgcctctggggtggtctcctctatatcattgtgcctcag
aatagcaaactgggtactgtgcccctcacagtgaagggagccgttcgtgccccattctac
aagctaggggagacatccaaggaagagtggaagaggcgtctcctggaatatccaggtccg
tggggagaactggccactgacaacctcatcttgactgtgcctactgcaaatcttcgaact
ctggagaaccctgagccactgctccgcctctgggatgaggtgatgcaggctgtggctaag
ttgggaggcgagcccttccctttgcggctgccacagaggatagtggctgatgttcagatc
tcagtaggctggatgcatgcagggtaccccatcatgtgccatctggagtcagtgcaggag
ctcattagtgagaagctcatccggaccaagggactgtggggtcctgtgcatgagctgggc
cgcaaccagcagaggcaggagtgggagttccccccacatactacggaagccacatgcaac
ctgtggtgtgtttatgtgcatgaaacagttctgggcatacctcgaagccgtgccaacatt
gcgctatggccccctgttcgggagaagagagtccgaatgtatttaagcaagggacccaat
gtgaaaaactggaatgcctggactgcgttggaaacgtacctacagcttcaagaggccttt
ggttgggagccatttattcgtctcttcactgagtacagaaaccagacaacgaactcgccc
acagacaacgtcaacaaaatgaatctctgggtcaagatgttctcccagcaagtgcagaag
aatctggctccgttctttgaggcctgggcctggcctatccagaaagaagtggctacaagc
ttagcctatctgcctgaatggaaagaaaatataatgaaattgtatcttctcacacagttg
taa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system