KEGG   Rattus norvegicus (rat): 362376
Entry
362376            CDS       T01003                                 
Symbol
Herc6
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
  KO
K22372  E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    362376 (Herc6)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   362376 (Herc6)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2 PGA_cap
Other DBs
NCBI-GeneID: 362376
NCBI-ProteinID: NP_001012492
RGD: 1561739
Ensembl: ENSRNOG00000023969
Position
4:complement(88854612..88897043)
AA seq 1027 aa
MYFTWAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQS
TKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKI
NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP
LAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS
CGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAY
VYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFVTTCR
HTRSTSVSMKILPEIIRITQPLVKKWRAAKKGKVHEDAKREISLIFSSPACLTASFLKKR
DAGENNFINVDLKLARDVFKMLTAEKWISSLITTCLEETLLRGLPYSSPHQEALLVFLLL
PECSIMQDPKNWKTLAFEFASAIHKMRSKSLTFLRNWWASLEVSSLNSLVQMLKKTIVSQ
LHNEVPMMKDTSNLKVSLEMMKEVQKILEKTNSHLHNEVPKMEDTSNLKVLLEVMKEVHE
ANCQLPENAFIMNDIFNFNTEEGIMAKQQMFFIKYYSMVFNDFPFILDLPSKIILMKHDS
SVKLSDEVKVAASPEKMGCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSVGFINEIR
PEGGGVSSEFFHCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGLSLN
NLNVINLSFPLALYKKLLEQKPSLEDLKDLSLLLGRNLQEVLNCEAGVIEELHMYFSIYW
DQRDVDLIPDGISVPVNETNKRDYVSKCVDYIFNISIKTIYDEFHRGFYKVCNRDSIRHF
QPEELMAAIIGNPTCDWKQFENNSKYENGYSKSHPTILLFWKAFHELTLDEKKKFLLFLT
GCDRLHVKGLQNEGIRFRCPEVFSERDNPRSLTCHSILDLPKYSTMRRMKEALQVAINNN
KGFISPE
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgtacttcacctgggctccaggaaggcggcagcctcggcgcctggaggcaggaactggt
cttaagctcttgaaggcggccagcggggaacgccactcgctgctactgttcagcaaccac
agggtgtactcctgcggggacaacagcaggggccagctgggccagaagagtccgcagagc
accaaacggccagaaccaattcaggcactaagtactgtacacattgacctggtgagctgt
gggaaggagcactcagtggctgtctgccaccaaggaagggtcttcacatggggagccggt
tctgaagggcagctggggattggagaatctaaggaaataagcttcatgcctacgaaaata
aactctctggctggcataaaaataatccaagtttcctgtggacactaccactctttggca
ttatcagaagatggccaagtgttttcatggggaagtaacagacaaggacaactgggcctg
gggaataatttatgttcccaagccagcccacagaaggtgaagtccctggaggggatccca
ctggctcaagtagctgcaggtggcacacacagttttgctctgtctctcatggggacttca
tttggctgggggaacaacagatctgggcagctggccctcagtgggaacagtgctaaagag
caaatctacaagcctcattcaattggtgccctgaagactctcaatgtggtttatattagc
tgtggttatgagcacacttcagtgcttaccgaggatggacaagtgtttacatttggaggc
agtagctctgaacagctacagcacagccccaggagtgggagaggaggtccacaactcata
gaagggattggcggccatgtttcacagatagaatgtggaagttatcacaccattgcatat
gtctacaccactggtcaggtggtatctttaggccgtggaccaagttgcacaagcaacgca
actcatcaggaggctgcttgctctgacgttacctgcttgctatctgccaaggaccttgtg
gatattgaagtcaaagacatttttgctggagcacacgccaactttgtgacaacctgccgg
catactaggtccacaagtgtttccatgaaaatcctgccagaaattatccgaatcacccag
ccactggtaaagaaatggcgagcagcaaagaaaggaaaagtccatgaagacgccaaaaga
gaaatcagcttgatattttcatctcctgcttgtttgactgcaagttttttgaagaaaaga
gatgctggagagaataatttcattaacgtggacttaaaactggcaagggatgtcttcaag
atgttaacagcagagaaatggatttcctccttgataaccacttgtcttgaggagactctg
cttagaggtcttccatacagctctccacatcaagaagctctattagtttttcttttgctc
ccggaatgttccattatgcaggatcccaagaactggaagacactggcatttgaatttgca
agcgctattcataaaatgaggtcaaagtcattaacattcctgagaaactggtgggcatct
ttggaagtttcttctctgaactcactggtccagatgctaaagaaaaccatcgtctctcaa
ctgcataatgaagttccaatgatgaaggatacgtctaaccttaaagtttctttagaaatg
atgaaagaagtgcaaaagatactagagaaaaccaactctcatcttcataatgaagttcca
aagatggaggatacgtctaatcttaaagttctcttagaagtgatgaaagaagtgcatgag
gctaactgtcaacttccagaaaatgctttcatcatgaatgacatctttaacttcaataca
gaagaaggaataatggccaaacagcaaatgttctttataaaatactattctatggttttc
aatgattttccatttatccttgatttgccatccaaaattatattaatgaaacatgactca
tctgtaaagctgtcggatgaagtcaaagtcgctgcatctccagaaaagatgggatgcccg
ttctttatactgaaagtcagacgaagtcatctggtggaagacaccttgcgtcaattaaga
caagctgaagattttgaccttaggaagacactatcggtcggatttattaatgaaattcgt
cctgagggtgggggagtaagttctgagttcttccactgtatatttgaagagatgacagac
cccaaatatgaaatgttcatgtatcctgaaaatggttccaacatgtggtttccagtcaat
cccaagtttgagaagagcagatatttcctctttgggatcttatgtggactctccctaaat
aatttaaatgttatcaacctctctttcccactggctttatataaaaaacttttggagcaa
aagccatctttggaagatttaaaagaccttagtcttctcctggggaggaatttgcaagaa
gttctaaattgtgaggctggtgttattgaagaacttcacatgtatttttctatatactgg
gatcaaagagatgttgatttaattccagatgggatctctgtgcctgtgaatgaaacaaac
aagagagactatgtgtccaagtgtgttgattacatttttaacatttctataaagacaatt
tatgacgaatttcatagaggattttacaaggtgtgtaaccgggacagtattaggcatttc
cagcctgaagaactaatggcagcaataattggaaaccctacttgtgactggaaacaattt
gaaaataattcaaagtatgaaaatggatattccaaatcacacccaactattctactgttt
tggaaggctttccatgaactaactttggatgaaaagaaaaagttcctcttgtttcttaca
ggatgtgataggctacatgtaaaaggcctacagaatgaaggaataagattccggtgtcct
gaagttttcagtgaaagagataacccaagatcattgacatgtcacagtattctagacctg
cctaagtattccacaatgagaaggatgaaggaagcacttcaggttgcaatcaacaataac
aaggggtttatctcaccggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system