KEGG   Rattus norvegicus (rat): 362398
Entry
362398            CDS       T01003                                 
Symbol
Plxna1
Name
(RefSeq) plexin-A1
  KO
K06820  plexin A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    362398 (Plxna1)
SSDB
Motif
Pfam: Plexin_cytopl TIG Plexin_RBD TIG_2 Sema TIG_plexin PSI RasGAP
Other DBs
NCBI-GeneID: 362398
NCBI-ProteinID: XP_002729444
RGD: 1560871
Ensembl: ENSRNOG00000017003
UniProt: A6IB60 D3Z981
Position
4:complement(123295165..123340132)
AA seq 1912 aa
MMLTLIGPEYLGLRPQPTMPLPPLSPRTLLLLLLLLLRNVWIAISSPPAGLGPQPAFRTF
VASDWGLTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSC
PHGLGSTDNVNKLLLLDYAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVR
EAGSMAGVLIAGPPGQGQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDADMFGFVYQDEF
VSSQLKIPSDTLSKFPAFDIYYVYSFRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKIVR
LCVNDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGKALAKQLGLAEDEDVLFTVFAQG
QKNRVKPPKESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDD
DFCGQDFNQPLGGTVTIEGTPLFVDKEDGLTAVAAYDYQGRTVVFAGTRSGRIRKILVDL
ANPSGRPALAYESVVAQEGNPILRDLVLSPNHQYLYAMTEKQVTRVPVESCVQYTSCELC
LGSRDPHCGWCVLHSICSRQDACERAEEPQRFASDLLQCVQLTVQPRNVSVTMSQVPLVL
QAWNVPDLSAGVNCSFEDFTETESILEDGRIHCHSPSAREVAPITQGQGDQRVVKLYLKS
KETGKKFASVDFVFYNCSVHQSCLACVNGSFPCHWCKYRHVCTNNAADCAFLEGRVNMSE
DCPQILPSTHIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGNPARVTALRFNSSS
LQCQNSSYSYEGNDVSDLPVNLSVVWNGNFVIDNPQNIQAHLYKCPALRQSCGLCLKADP
RFECGWCVAERRCSLRHHCPADSPASWMHAHHGSSRCTDPKILKLSPETGPRQGGTRLTI
TGENLGLRFEDVRLGVHVGKVLCSPVESEYISAEQIVCEIGDASTLRAHDALVEVCVRDC
SLHYRALSPKRFTFVTPTFYRVSPSRGPLSGGTWIGIEGSHLNAGSDVAVSIGGRPCSFS
WRNSREIRCLTPPGQTPGSAPIVININRAQLSNPEVKYNYTEDPTILRIDPEWSINSGGT
LLTVTGTNLATVREPRIRAKYGGIERENSCMVYNDTTMVCRAPSIDNPKRSPPELGERPD
EIGFIMDNVRTLLVLNSSSFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNS
RLNYTVLIGSTPCILTVSETQLLCEAPNLTGQHKVTVRAGGFEFSPGMLQVYSDSLLTLP
AIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQ
TDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTK
KHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKN
HPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEA
RYSLSEDKLIRQQIDYKTLTLNCVNPEHENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVP
YSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQ
TSAYNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLD
QREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDE
QADKHQIHDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSC
STSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLS
QFNSMSALHEIYSYIAKYKDEILVALEKDEQARRQRLRSKLEQVVDTMALSS
NT seq 5739 nt   +upstreamnt  +downstreamnt
atgatgctcacccttataggacctgaataccttggcttgaggccccagcccaccatgcca
ctgccacctctgagccctcggacactgctgctgctcttgctgctgttgctgaggaatgtg
tggatagccatcagctcacccccagctggtttgggtccacaacctgctttccgcaccttt
gtggccagtgactggggcctcactcacctggtggttcatgaacagacgggagaggtatat
gttggcgccgtgaaccgcatttacaagctatcagggaacctaaccctgcttcgggcccat
gtgacgggtcccgtagaagacaatgagaaatgctacccaccccccagtgtacagtcgtgc
ccacatggtctgggcagcacagacaacgtcaacaagcttctactgctggactacgctgcc
aaccgcctgttggcctgtggcagtgcctcacaaggcatctgccagttcctgaggttggac
gatctcttcaagctgggcgagccacaccaccgtaaggaacactacctgtccagtgtgcga
gaggctggcagcatggcgggagtgctcattgccgggccacccggccagggccaggccaag
ctcttcgtgggcacacccattgatggcaaatcagagtactttcccactctgtccagtcgc
cggctcatggccaatgaggaagatgctgacatgtttggctttgtgtaccaggatgagttt
gtgtcatcgcagctcaagatcccttcagatacactgtccaagttcccagcctttgacatc
tactatgtgtacagtttccgcagcgagcagttcgtatactacctcaccctgcagctggac
acgcagcttacctcgcccgatgccgctggtgagcacttcttcacctccaagattgtacgg
ctatgtgtgaatgaccccaagttctactcttacgtggagttccccattggctgtgaacag
gctggagtggagtaccgcctggtgcaggacgcctatctgagcaggccaggaaaagccctg
gccaagcagctgggccttgctgaggatgaggacgtgttgttcacagtgtttgcacagggc
cagaagaaccgtgtgaagccacccaaggagtcggcgctatgcctgttcacactgagggcc
atcaaggagaaaatcaaggagcgcatccaatcatgctaccgtggcgaaggcaagctctca
ctgccttggctgctcaacaaggagctgggctgcatcaactcgcccctgcagattgatgac
gacttctgcgggcaggacttcaaccagccacttgggggcacggtcaccatcgagggcaca
cccctttttgtggacaaggaagatggcctgactgctgtggctgcctatgactaccagggc
cgcaccgtggtttttgctggcactcgcagcggccgcatccgcaagattctggtggacctg
gcaaaccccagcggcaggccagccctggcttatgagagtgtggtggctcaggagggcaac
ccgatcctgcgtgacctggtcctcagccccaaccaccagtacctctatgctatgacggag
aagcaggtgacgcgggtgcctgtggaaagctgtgtccagtatacttcctgtgagctgtgc
ctggggtctcgggacccccactgtggctggtgtgtcctgcacagcatctgctctaggcag
gatgcctgtgagcgggcagaagagccccagcgttttgcctctgacctgctgcagtgtgtg
cagttgactgtccagccacgcaatgtgtcagtcaccatgtcccaggtgccgcttgtgctg
caggcttggaacgtgcctgacctctcagctggtgtcaactgctcctttgaggacttcacg
gagactgagagcatcctggaagatggccgcatccattgccactcaccttctgcccgggaa
gtggcgcccatcacacagggtcagggagaccaacgggtggtgaagctctacctcaagtcc
aaggagacagggaagaagtttgcatctgtggactttgtcttctataactgcagtgttcac
cagtcctgcctggcatgtgtcaatggctccttcccctgccactggtgcaaataccgccac
gtttgtaccaacaatgcggctgactgtgcctttctggaaggccgtgtcaacatgtctgag
gactgcccacagatcctgccttctactcacatctatgtgccagtgggtgtggtgaagccc
atcaccctggccgcacggaacctgccgcagccacagtcaggtcagcgagggtacgagtgc
cttttccacatcccaggcaacccggcccgagtcactgcactacgtttcaacagctccagc
ctgcaatgccagaactcctcgtactcctatgaggggaatgatgtcagcgacctgcctgtg
aacctgtcggttgtgtggaatggcaactttgtcattgacaacccccagaacatccaggcc
cacctctacaagtgcccagccttgcgccagagttgcggcctctgcctcaaggcggacccg
cgttttgagtgtggctggtgtgtagctgagcgccgctgttccctacgacaccactgccca
gctgactcaccagcctcctggatgcatgcccaccacggcagcagccgctgcacagacccc
aagattctcaagctgtccccagagacaggccctcggcagggagggactcgactaaccatc
accggtgagaatctgggcctccgttttgaggatgtgcggctaggcgtgcacgtgggcaag
gtgctttgcagccctgtggagagcgagtacatcagtgcagaacagattgtgtgtgagatc
ggagatgccagcacactgcgagcccatgatgccctggtggaggtgtgtgtgcgggactgc
tccctccactaccgagctctgtcccccaagcgcttcacctttgtgacacccaccttctac
cgtgtgagcccctcccgggggcctctgtccggaggtacctggattggtattgaagggagc
catctgaatgcaggcagcgatgtagctgtgtccattggcggtcggccctgctccttctcc
tggagaaactcacgagagatccgatgcctgacacctcccgggcagacccctggcagtgcc
cctattgttatcaacatcaaccgtgcccagctctccaaccccgaggtgaagtacaactat
actgaagaccctactatcctgaggatcgaccctgagtggagcatcaacagtggtgggacc
ctcctaacagtcacaggcaccaatctggccaccgtccgtgaacctcgaatccgggccaag
tatggaggcattgagagggaaaatagctgcatggtgtacaatgacaccaccatggtgtgc
cgggcgccgtctatagacaacccaaagcgcagcccgccagaactaggagagcggccagat
gagattggtttcatcatggacaatgtccgcacgctgctggtactcaacagctcctcattc
ctttactacccggaccctgtactggagccactcagccctactgggctcttggagctgaag
cccagttccccgctcattcttaaggggcggaatctcctgccacctgctcctggcaattcc
cggctcaactacacggtgctcatcggctccacgccttgtatcctcaccgtgtctgagaca
cagctgttgtgtgaagcacccaacctcacggggcagcacaaagtcacggtgcgggcaggg
ggcttcgagttctcacctgggatgctgcaggtgtactcagacagcctgctgacactgccg
gccattgtgggtatcggtggggggggtggcctcttgctgctggtcatcgtggctgtgctc
atcgcctacaaacgcaaatcccgggatgctgaccggacccttaagcggctgcagctccag
atggacaacctggagtcacgtgtggccctcgagtgcaaggaagcctttgcagagctacag
acagacatccatgagctgaccagcgacctggatggtgctggcatcccgttccttgactac
cgcacatatgccatgcgagtgctatttcctgggattgaggaccatcctgtactcaaggag
atggaggtgcaggccaatgtggagaagtcgctgacactgtttggacagctgttgaccaag
aagcatttcctgctaaccttcatccgtacactggaagcccagcgtagcttctctatgcgt
gaccgtgggaacgtggcctcgctcatcatgacggccctgcagggtgagatggagtatgcc
acaggagtgctaaagcagctgctctccgacctcatcgagaagaacctggaaagcaagaac
caccccaagctcctgttgaggaggaccgaatcagtggcggagaagatgttaaccaactgg
ttcaccttccttttgtataagttccttaaggagtgtgctggggagccgcttttcatgctg
tactgtgccatcaagcagcagatggagaagggccctattgatgccatcacaggggaggcc
cgctactctctgagcgaagacaagctcattcggcagcagattgactacaagaccctgacc
ctgaattgtgtgaaccctgaacatgagaatgcacctgaggtccctgtgaagggactgaac
tgtgacaccgtgacccaggtcaaggagaagctactagatgctgtatataagggtgtgcct
tactcacagcggcccaaggctggggacatggacctggagtggcgccagggccgcatggca
cgcatcatccttcaggatgaggatgtcaccaccaaaattgacaatgactggaagaggctg
aacacgctggctcactatcaggtgacggatgggtcatcagtggcactagtacccaagcag
acgtctgcctacaacatctccaactcctctaccttcacgaagtccctcagcagatacgag
agcatgctgcgtacagccagtagccctgacagcctacgctcacgaacacccatgatcacg
ccagacctggaaagtggaacaaaactgtggcacctggtcaagaaccacgaccacctggac
caacgtgaaggcgaccgtggcagcaagatggtctctgagatctacctgacaaggctgctg
gctactaagggaacactgcagaagttcgtggatgacctgtttgagaccatcttcagcacg
gcgcaccgtggctcagccctgcctctggccatcaagtacatgtttgacttcttagatgag
caggccgacaagcaccagatccacgactcagatgtgcgccatacctggaagagcaattgc
ctgcctctgcgcttctgggtgaatgtgattaagaaccctcagttcgtgttcgacatccac
aagaacagcataacagatgcctgcctctcagtggtagcgcagaccttcatggactcctgc
tccacatcagagcacaagctgggcaaagactcaccctctaacaagttgctctatgccaag
gacatccccaactacaagagctgggttgaaaggtactatgctgacattgccaagatgccc
gccatcagtgatcaagacatgagcgcctacctggcagagcagtcccggctgcatctcagc
cagttcaacagcatgagtgccctgcacgagatctactcctacatcgccaagtacaaggac
gagattctggtggctctggaaaaagatgagcaggctcgaaggcagcggcttcggagcaaa
ctggagcaggtggtggacacaatggccttgagcagctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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