KEGG   Rattus norvegicus (rat): 362466
Entry
362466            CDS       T01003                                 
Symbol
Bicd1
Name
(RefSeq) protein bicaudal D homolog 1
  KO
K18739  protein bicaudal D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    362466 (Bicd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    362466 (Bicd1)
   04131 Membrane trafficking [BR:rno04131]
    362466 (Bicd1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     362466 (Bicd1)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    362466 (Bicd1)
SSDB
Motif
Pfam: BicD Bap31_Bap29_C DUF1759 HALZ ATG17_like
Other DBs
NCBI-GeneID: 362466
NCBI-ProteinID: NP_001102123
RGD: 1309444
Ensembl: ENSRNOG00000036911
UniProt: A6IN76
Position
4:184208891..184362840
AA seq 835 aa
MAAEEALKTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYD
GLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLNKILEMQNELKQSR
AVVTNVQAENERLSAVVQELKENNEMVELQRIRMKDEIREYKFREARLLQDYTELEEENI
TLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKN
EREQKNNLRKELSQYISLSDNHISISVEGLKFAEDGSEPNNDDKMNGHLHGPLGKLNGDY
RAPTARKGESLHPVSDLFSELNISEIQKLKQQLIQVEREKAILLANLQESQTQLEHTKGA
LTEQHERVHRLTEHVNAMRGLQNSKELKAELDCEKGRNSAEEAHDYEVDINGLEILECKY
RVAVTEVIDLKAEIKALKEKYNKSVENYTEEKTKYESKIQMYDEQVTNLEKTSKESGEKM
AHMEKELQKMTGIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQ
SRVTRSGSLKGPDDPRGLLSPRLSRRGVSSPVESRTSSEPVSKENTETSKEPSPTKTPTI
SPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELA
PMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMV
TETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLL
RMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKIVSSLLPPYRHSAHN
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggccgcagaagaggcgctgaagacggtagaccactataagactgagatagagagactg
accaaggagctcacagaaacgacccacgagaagattcaggctgcggagtatgggctggtg
gtgctggaggagaaactgactctcaagcaacagtatgacgagctggaggccgagtatgac
ggcctcaaacaagagctggagcagctcaaagaggcatttgggcagtccttctctatccac
cgtaaagtggctgaggatggagagactcgggaggaaacacttcttcaggagtctgcatcc
aaggaagcttactatctaaacaagatcttggagatgcagaatgagctgaagcagagccgg
gctgtagttacaaatgtccaggcagaaaacgagagactctcggctgttgtacaggaactg
aaggagaacaacgagatggtggagctacagaggatacgaatgaaagatgaaatccgagaa
tataaattccgggaagcccgactccttcaggactacacggaattggaagaagaaaacatt
acattgcagaagctagtgtccacattaaagcagaaccaggttgaatatgaaggcttaaag
catgaaattaagcggtttgaagaagaaacagtattactgaacagccaactagaagatgcc
attcgactgaaggaaattgcagagcaccagttggaagaagccctcgaaacactgaagaat
gaaagggagcaaaaaaacaacctgaggaaggagctgtcccagtacatcagcctcagtgac
aaccacatcagcatctcagtcgaggggctcaagtttgccgaggacgggagtgagccaaac
aacgatgacaagatgaacgggcatctccacgggcctctggggaagctgaatggagactat
cgtgcgcccactgccaggaaaggagagtccctacaccctgtgtctgacttattcagtgag
ttgaacatttcagaaattcaaaaactgaagcagcagcttattcaggtagagcgggaaaaa
gcgattcttctggccaacctccaggagtcacaaacccagctagaacacaccaagggggca
ctgacagagcagcatgaacgagttcaccggctcacagaacatgtcaatgctatgaggggt
ttgcaaaacagtaaagagctcaaggctgagctagattgtgagaagggccggaactcagcg
gaggaagcccacgactatgaggtagacatcaatggcttagagatccttgagtgtaaatat
agagtggctgtcacggaagtcattgatttgaaagcagaaattaaggccttaaaggaaaaa
tataacaaatctgtagaaaattatacagaagaaaagaccaaatatgagagtaagatccaa
atgtatgatgagcaagtgacaaaccttgagaagacatctaaggagagtggtgagaagatg
gcccacatggagaaggagttgcaaaagatgactggcatagccaacgaaaaccacaacacc
ctcaatacagctcaggatgagttggtgacatttagtgaggaactagcccagctttaccac
catgtgtgtctatgtaataatgaaactcccaatagagtcatgttggactactatagacaa
agcagagttactcgaagtggcagcctcaaggggcctgatgatcccagagggcttttgtca
ccaagattatccaggaggggtgtttcatcccctgtagaatcaaggacatcatccgagccg
gtttcaaaggaaaacacagagactagtaaagagccaagtccaactaagactcccacaatc
tctcctgttattactgccccaccatcatctccagttttggatacaagtgatatccgcaaa
gagccaatgaatatctacaacctcaatgccataattcgggaccaaatcaagcatctgcag
aaagcagtggacaggtccttacagctgtctcgtcaaagagcagcagcccgagagttggcc
cccatgatcgataaggacaaggaagccttaatggaggagattctcaagctgaagtccttg
ctgagcaccaaacgggagcaaattgccacactgagggcagtgttgaaagccaataagcag
acagccgaagtggctttagctaacctgaagaacaaatatgaaaatgaaaaagcaatggtt
actgaaacaatgacaaaactgaggaacgagctaaaggctttgaaagaagatgctgcaacc
ttctcatccctgagagcaatgtttgcaacaagatgtgatgaatatgtcacacagttggat
gagatgcagagacagttagcagctgcagaagacgagaagaagactctaaacactttatta
cgaatggctatccagcaaaagcttgccctgacacagaggctggaggacttagagtttgac
catgagcagtcccgacgcagcaaaggcaaacttggaaagagcaagatcggcagccctaaa
attgtcagcagcctgctgcctccgtaccgccacagtgctcacaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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