KEGG   Rattus norvegicus (rat): 362501
Entry
362501            CDS       T01003                                 
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    362501 (Topors)
   03036 Chromosome and associated proteins [BR:rno03036]
    362501 (Topors)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    362501 (Topors)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     362501 (Topors)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    362501 (Topors)
  UBL E3 ligases
   362501 (Topors)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    362501 (Topors)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   362501 (Topors)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 Rad50_zn_hook zf-RING_4
Other DBs
NCBI-GeneID: 362501
NCBI-ProteinID: NP_001102128
RGD: 1305270
Ensembl: ENSRNOG00000006485
UniProt: A0A8I6ANV8 A6IIQ9
Position
5:complement(60184076..60195979)
AA seq 1042 aa
MGSQPPPLGSPLSREEGEAPPLAPAEEGRRRSRRVRLRGSCRHRPSLLGRRELASSGPAV
PATASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRC
LHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTAPEVRRF
RYRTTMTRERNASLYSPSSTVSRRTSTPPDSGVLFEGLGISTRPRDVDIPQFMRHMALRG
PTATDERSLRKVQEQDIINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPPSSEEGSRSDSSVITISPDEAEAQELDVNVSTIRQAPWDDE
TPGPSYSNSEQVHVGVSSLLNSSDSSDEELVSGGAASQIQGVQANDDVNNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDASRASSPRSVL
GKDEQMGKSHCDSDTRINSKKEEKRSTSLSTPRDSSSTRGDRACSPYNHRHRKGGRSRSS
DSRSQSRSGHDQRNHRKHHGKKRLKNKRSRSRESSSKPRARKDKKRSRTRDSSWSRRSQT
LSLSSGSTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARRKNHSERKYYYYERHRSRSVSSNRSRTT
SAVPDRMRNEKPGGKRKYKTRHLEDTNEEAQPSRAFASRVKESHYQKPSKLDGGSKDESD
SFSDSRPSDRETKHKRRKRRARSLSVEIVYEGKATDTSKHHKKKKKKHKKKHRKHHGDNT
SRSPVVITIDSDSDGDAGVKASVECSQSSLPQPGQDEVSTPSSEAFETKDVVTIEDELAV
EDKECDVTALTNDLSTSQAVESSESPPVSVEQTLDVREDSTFASDVESQSSNASIPTEPS
RPLPSPRTSLSSVSPGRDCDMS
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggggtcgcagccgccgccactggggtctccgctgtctcgcgaggagggtgaagcgccc
cctctggcgcctgccgaggaggggaggcgcagaagccgccgggtacgccttcgcggatcc
tgccgccaccgaccgagcctcctgggccggcgggagctggcttctagcggcccagcggtc
cctgccaccgcgtcctcggagataatggcctcagctgccaaggaatttaaaatggacaac
ttttcacctaaagctggcactagcaaactgcagcagacagtaccggccgatgcatctcct
gattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgctgc
ctacataagttctgtttccgctgtgtacaagagtggtcaaaaaacaaagccgagtgccca
ctgtgtaagcagccctttgattccattttccattctgtgagggctgaagatgacttcaag
gagtatgtgctaaggccttcctacaatggttcttttaccgcccctgaggttcgaagattc
cgctaccggacaactatgacgagagaacggaacgcctctctttactctcccagtagcact
gtcagtagaagaacaagcactccgccagacagtggagtgctgtttgaagggttaggcatc
tcaacaagacctagagatgttgacattcctcaatttatgagacacatggcattaaggggg
ccaactgctacagatgagaggtctttgcggaaagttcaagaacaagatattattaatttt
aggcgcactctttatcgtgctggtgttcgagttagaagtatcgaagacggtggccgctac
agggatatttcagctgagttcttccgtagaaatccagcttgccttcacagattagttcct
tggttaaaacgtgagcttaccgttctttttggagcccatggctcgttagtcaatattgtc
cagcacatcatcatgagtaatgtcactcgctatgatttggagagtcaggcatttgtgtcg
gacctaagaccatttttgcttaatcgaactgagcattttatacacgagtttatcagtttt
gctagatctcccttcaatatggcagcttttgaccagcatgctaattatgattgccctcct
tcatctgaagaaggcagccgttctgattcttcagttattacaatatcaccagatgaggct
gaagcccaagagctagatgtgaatgtatccaccatcaggcaggcaccatgggatgatgaa
actcctggaccgtcatattcaaattcagagcaagtgcatgttggcgtgtcttccctttta
aattcttcggacagttcagatgaagaacttgtttctggaggagccgcatctcagatacaa
ggagtacaggccaatgacgacgtaaacaatgacagcgattcatcatcagataattgtgtc
attgttgggtttgttaagccattagctgaacggaccccagaacttgttgaactgtcttct
gattctgaggagttgggctcttatgaaaaaatggaaacagtgaagacacaagaacaggag
cagtcttacagttcaggtgatagtgatgctagtcgagcttcatctccgcgttctgtcctt
ggaaaagatgagcagatgggtaaaagccattgtgattcggacacaagaataaactcaaag
aaagaagagaaacgatctacgtcattgtcaactcccagggacagctcatctacaagaggt
gacagggcatgttccccatataaccatcgacataggaagggaggaagatccaggagttca
gattcccgttcccaaagtagaagtggacatgatcagaggaatcacaggaagcatcatggg
aagaaaagattgaagaataagagatccagaagcagggagagtagtagcaaacctagagcg
agaaaggacaaaaagagatcaagaactagagatagcagctggtcaagaagaagccagacc
ctttctctaagtagtggaagcactagtagatcaaggtctcgtagcagtgatcatggcaag
cgaagatcacgaagcagaaatcgagatcgctattatttaagaaataattatggaagcaaa
tacaagtgggaatatacttactatagccgaaacaaggacagagatggttatgagtcgtca
tacaggaggaggactctttcaagagcccattattctagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgccaggaggaagaaccacagtgaaaggaaa
tactactactatgagaggcaccgatcgaggagcgtgtcgagtaataggtcgaggactacg
tcagctgtccctgaccggatgagaaatgagaagcctggagggaagcggaagtacaagacc
cgccatttggaagacactaatgaggaggcacaaccgtctcgtgcatttgcttccagagtg
aaggagagtcattaccaaaagccatcaaaattggacggaggttctaaagacgagagcgat
agcttttcagatagcagaccatcagacagagagacaaaacacaagaggaggaaaaggagg
gcacggagcctaagtgtagagatagtttatgaaggaaaagctacagacacaagcaaacac
cataagaagaagaagaagaaacataagaagaagcataggaaacaccatggagataacact
tcacggtccccggtggttataaccatcgacagtgacagcgacggggatgctggagtgaag
gcaagtgttgagtgtagccagagcagtcttcctcagcctggacaggatgaagtctccact
ccatcctcggaagcatttgaaactaaagatgtcgtcacgatagaggatgagcttgctgtc
gaggacaaggagtgcgatgttacggcacttactaatgacttgagtaccagccaagctgtg
gagagcagtgagtcaccgccagtctcagttgaacagactcttgacgtacgagaagatagc
accttcgcctctgatgtggagagccagtccagtaatgcgtctattcccaccgagccatca
agaccattgccatctccacggacctcattatcctcagtgtctcctggtagagactgtgac
atgtcctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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