KEGG   Rattus norvegicus (rat): 362581
Entry
362581            CDS       T01003                                 
Symbol
Scmh1
Name
(RefSeq) polycomb protein SCMH1
  KO
K11461  polycomb protein SCMH1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    362581 (Scmh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362581 (Scmh1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     PRC1.4 specific proteins
      362581 (Scmh1)
SSDB
Motif
Pfam: MBT SLED SAM_1 RBR SAM_2 SAM_PNT
Other DBs
NCBI-GeneID: 362581
NCBI-ProteinID: NP_001103139
RGD: 1305788
Ensembl: ENSRNOG00000032183
UniProt: A2RRU0
Position
5:139276352..139401118
AA seq 664 aa
MLVCYSVLACESLWDLPCSIMGSPLGHFTWDKYLKETSSVPAPVHCFKQSYTPPSNEFKI
SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSSEIQPIGNCEKNG
GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIKIFHKEPPSPSHNFFKMGMKLEAVDRKN
PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
IPKNPSPSSDVSTEKPSINSTKTVLEPQPGQRGRKPGKKRGRTPKILIPHPTSTPSKSAE
PLKFPKKRGPKPGSKRRPRTLLSPPPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCI
YLNKSGSTGPHLDKKKIQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGG
EVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHVSLTATEYS
HGHDRYLPGETFVLGNSLTRSLETHSDLMDSALKPANLVSTSQTLRTPGYRPLLPSCGLP
LSTVSAVRRLCSRGVLKGTRERRDVESFWKLNHSPGSDRHLESRDPPRLSGRDPSSWTVE
DVMQFVREADPQLGSHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSFHIDRLK
QGKF
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgctggtttgctacagtgttttagcttgtgagagtctctgggaccttccctgctccatc
atggggtcacctctaggtcattttacctgggacaaatacctaaaagaaacaagttcagtc
ccagcacctgtccattgcttcaagcagtcctacacacctccaagcaatgagttcaagatt
agcatgaaattggaagcacaggaccccaggaacaccacgtccacctgtattgccacagta
gttggactgacaggtgcccgactccgtctgcgccttgatggcagtgacaacaagaatgac
ttctggagactggttgactcctccgaaatccaaccaattggaaactgtgagaagaatggc
ggtatgctgcagccacctctaggatttcggctgaatgcctcctcttggcccatgttcctt
ttgaagacgctaaatggagcagagatggctcccatcaagattttccataaggagccacca
tcaccttcccacaacttcttcaaaatgggaatgaagttggaagctgtggacagaaagaac
cctcatttcatctgcccagccactattggagaggtccgaggctcagaggtgctggtcacc
tttgatgggtggcgaggcgcatttgactactggtgccgctttgactcccgggacatcttt
cctgtgggctggtgttctttgactggagataacctgcagccgcctggcaccaaagttgtg
attccaaagaatccttccccttcgtctgatgtgagcactgagaagcccagcatcaacagc
accaaaactgtcttggagcctcagccagggcagagagggcgcaaaccaggaaagaagcgg
ggccgaacgcccaagatccttattccccatcccacctctaccccatccaagtcagctgaa
cctttgaaatttccaaagaagagaggccccaagcctggcagtaagaggagacctcggact
ttgctgagcccaccacccacctcaccaacaaccagcactcctgaaccggacaccagcact
gttccccaagatgctgccaccatcccaagttcagccatgcaggcccccacagtttgtatc
tacttgaacaagagcggcagcacgggcccccacttggataaaaagaagatccaacaactc
cctgaccattttgggccagcccgtgcctctgtggtgttgcagcaggctgtccaggcttgc
attgactgtgcttatcaccagaaaactgtcttcagcttcctcaaacagggccatggcggt
gaagtcatctcagccgtgttcgaccgggaacagcacacactcaacctcccagccgtcaac
agcatcacctatgtcctccgtttcctggagaagctctgccacaaccttcggagtgacaat
ctgtttggcaaccagccctttacacagactcacgtgtcactcactgccacagagtacagc
cacggccacgacaggtacctaccaggtgaaacctttgtcctgggcaatagcctgacgagg
tccttggagacacactcagacctgatggactctgccttgaagcctgccaacctcgtcagc
acgtcccagaccctccggactcctggctatcggcccttgcttccctcctgtggccttcca
ttgagcactgtctctgctgtgcgcaggctctgctctcggggagtgttaaaaggaacaagg
gaaagaagggatgtggaatcattttggaaactaaatcattccccagggtcagatcgacac
ctggagagccgagatccccctcgcctaagtggccgggacccctcctcatggacagtggag
gatgtgatgcagtttgtccgggaggctgatcctcagcttggatcccatgctgacctcttc
cgaaaacatgaaatcgatggcaaggccctgctcctgctgcgcagtgacatgatgatgaag
tacatgggcctgaagctggggcctgccctcaagctctcctttcacattgaccggctgaag
cagggcaagttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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