KEGG   Rattus norvegicus (rat): 362584
Entry
362584            CDS       T01003                                 
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain precursor
  KO
K08131  collagen type IX alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno04820  Cytoskeleton in muscle cells
rno04974  Protein digestion and absorption
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    362584 (Col9a2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    362584 (Col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    362584 (Col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    362584 (Col9a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    362584 (Col9a2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    362584 (Col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    362584 (Col9a2)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   362584 (Col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 362584
NCBI-ProteinID: NP_001102145
RGD: 1307029
Ensembl: ENSRNOG00000011502
UniProt: A6IS03 D3ZNT5
Position
5:139892798..139910131
AA seq 688 aa
MTALPAPRSLLLFLQVLWLALAQIRGPPGEPGLPGPPGPPGVPGSDGIDGDKGPPGKVGP
PGSKGEPGKPGPDGPDGKPGIDGLMGAKGEPGPMGTPGIKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPQGLQGVKGHPGKRGILGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAG
PKGEMGPRGYKGMVGSIGAAGPPGEEGPRGPPGRAGEKGDVGSQGARGPQGITGPKGTTG
PPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPG
ISGPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGLSGEPGLKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGLVGDRGVPGQPGRQGVVGRAASDQHIVDVVLKMIQEQLAEVA
VSAKREALGATGMVGLPGPPGPPGYPGKQGPNGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEMGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGRPGPVGLP
GFCEPAACLGASAYTSARLTEPGSIKGP
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgaccgccttgccagcgccccgcagcctcctccttttcctccaggtgctgtggctcgcc
ctggctcagatcagaggtccaccaggggagccgggtcttccagggccaccagggccacca
ggagtgcctggttcggatggcatcgacggtgacaaggggcctccaggtaaagttggtcct
ccgggatccaaaggagagcctggcaaaccggggccagatggtccagatgggaagcctggc
attgatggtttaatgggagccaagggagagcctggccccatgggaacccctggaatcaag
ggccagcctgggctcccagggccccctggcctgccgggccctggttttgctggacctccg
ggaccacctggacctgttggcctccctggtgagattggaaccccaggccccaagggggat
ccagggccagagggaccatcagggcccccaggaccccctgggaaaccaggccgaccagga
accatccagggcctggaagggagtgcggatttcttgtgtccaaccaactgtcctgctggt
gtgaaaggtccccagggtctgcaaggagtgaagggccatccaggcaaacgggggattctg
ggtgatcctggtcgccaggggaagccgggccccaagggagatgtgggtgcctctggagaa
caaggtatccctggaccaccgggtccccaaggcatcaggggctacccaggcatggcagga
cccaagggagagatgggtcctcgtggatataaaggcatggtgggctccatcggggctgct
gggccaccgggtgaagagggcccaagggggccaccaggccgagcgggtgagaagggggat
gtggggagccaaggtgcccgaggaccccaggggataacaggcccaaagggaacaactggt
ccaccaggcattgatggcaaggatgggaccccgggcatacctggcatgaagggcagtgca
ggacaggtgggacggccaggaagcccaggccaccagggcttagcgggtgtgccaggtcag
cctggaacaaaaggaggccccggagacaagggtgaacccggccagcagggcttcccggga
atctctggtccccctgggaaagaaggggagccagggcctcgaggagaaactggtccacag
ggcatcatgggagagaagggtgaccagggtgagagagggccagtggggcagccaggccct
caaggacgacagggccccaagggagagcagggatctccaggaattccaggaccccaaggc
ttgccaggcatcaaaggagataagggttccccagggaagaccgggccccgaggtggagtg
ggtgacccgggggtggccggcctcccaggagagaaaggagagaagggcctgtcaggcgag
ccagggcttaagggacagcaaggagttcgtggagagccgggctaccctggccctagcgga
gatgctggtgccccaggagtgcagggctatcctgggcttcccgggccccgaggactggtg
ggagatcgaggcgtgccaggacaaccggggagacagggtgtggtgggccgagctgccagt
gaccagcacatcgtggatgtggtgctgaagatgattcaagagcaacttgcagaggtagct
gtgagtgccaagcgagaagccctgggtgcaacagggatggtgggccttccaggacctcct
gggccccctggatatccaggcaaacagggacccaatgggcaccctggcccccgaggcatt
cctggcattgtgggagctgtgggtcagattggcaacactggacccaagggaaagcgtgga
gagaagggagatcaaggagaaatgggacgtggccatcccgggatgcctgggccaccaggg
atcccaggtcttcctggccggcctggccaggccatcaacggcaaggatggagacagaggg
tccccaggggccccaggagaggctgggcggcctgggcggccgggcccagtggggctccca
ggcttttgtgagcctgctgcctgcttgggagcctcagcctatacctctgctcgcctcacg
gagcctgggtctatcaaggggccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system