KEGG   Rattus norvegicus (rat): 362617
Entry
362617            CDS       T01003                                 
Symbol
Ahdc1
Name
(RefSeq) transcription factor Gibbin
  KO
K22592  AT-hook DNA-binding motif-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362617 (Ahdc1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    362617 (Ahdc1)
SSDB
Motif
Pfam: DUF4683
Other DBs
NCBI-GeneID: 362617
NCBI-ProteinID: NP_001128428
RGD: 1310031
Ensembl: ENSRNOG00000042855
UniProt: D4A5R3
Position
5:150512182..150578804
AA seq 1592 aa
MRVKPQGLVVTSSAVCSSPDYLREPKYYPGGPPTPRPLLPTRPPASPPDKAFSTHTFSEN
PRPPPRRDPSSRRPPVLAKGDDLLPPRAARPVSQAHCPTPAPDNNSLRHWDNGRVNLHPV
VQLIDIMKDLTRLSQDLQHSGVHLDCGGLRLSRPPAPPPGDLQYSFFSSPSLANSIRSPE
ERATPHAKPERPNHPLYEPEPEPRDSPQPGQGHGPGATATATGLPPEPEPDGPDYPELAD
ADILSELASLTCPEAQLLEAQALEPPSPQPEPQLLDPQPRFLDPQALEPLGEGLELPPLQ
PLADPLGLPSLTLQALDTLPDSLESQLLDPQALDPLPKLLDVPGRRLEPQQSLGHCQLAE
PLRLDLCSPHGPPGPEGHPKYALRRTDRPKILCRRRKAGRGRKVDSGPEGRLLPLPMPTG
LAAALAEPPPLPPPPPPPALSGPVPELEPESSQTPMVPTRKGKCRGVRRMVVKMAKIPVS
LGRRNKTTYKVSSLSSSLSVEGKELGLRVSSEPTPLLKMKNNGRNVVVVFPPGEMPIILK
RKRGRPPKNLLLGPGKPKEPTVVAAEAAAVTAATMAMPEVKKRRRRKQKLASPQPSYAAD
ANDSKAEYSDVLAKLAFLNRQSQCAGRCSPPRCWTPSEPESVHQAPDTQSISQFLHRVQG
FRRRGGKTGGFGGRGGGHAAKAARCSFSDFFEGIGKKKKVVAVAATGVVGPGLTELGHPR
KRGRGEVDAVTGKPKRKRRSRKNGTLFPEQVPSGPGFGEAGAEWAGDKGGGWAPHHGHPG
GQAGRNCGFQGTEARAFASTGLESGASGRGSYYAGAPSGQTELSQERQNLFTGYFRSLLD
SDDSSDLLDFALSASRPESRKASGNYAGPPSSALPAQRGLATFPSRGAKGSPVAVGNSGA
GTDPSFQPVLPSRQTFPPGRATSYGITPATSDCRAAETFPKLAPPPSAVARSPTTHPPAN
TYPPQYGGYGAGQSVFAPAKPFSGQDCANSKDCSFAYGSGNSLPASPSSAHSAGYAPPPT
GGPCLPPSKASFFNSSEGGPFSGSAPTPLRCDSRASTVSPGGYMVPKGTTASAASAASSS
SSSFQPSPENCRQFVGASQWPFRQGYGGLDWASEAFSQLYNPNFDCHVSEPNVILDISNY
TPQKVKQQTAVSETFSESSSDSTQFNQPVGGGFRRANSEASSSEGQSSLSSLEKLMMDWN
EASSAPGYNWNQSVLFQSSSKPGRGRRKKVDLFEASHLGFSTSTSATASGYPSKRSTGPR
QPRGGRGSGACSAKKERGGTAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGDSSMSPLPSQ
SRAFGVGERDPCDFMGPYSMNPSTPSDGTFGQGFHCDSPSLGAPDLDSKHFPPLAHPPTV
FDAGLQKAYSPTCSPTLGFKEELRPPPSKLTACEPLKHGLQGASLSHAAQAHLSCRDLPL
GQPHYESPSCKGTAYWYPPGSAARSPPYEGKVGSGLLADFLGRTEAVCLSAPHLASPPAT
PKADKEPLEMTRPPGPPRGPAAATAGYGCPLLSDLTLSPVPRDSLLPLQDTAYRYPGFMP
QTHPGLGGGPKSGFLGPMAEPHPEDTFTVTSL
NT seq 4779 nt   +upstreamnt  +downstreamnt
atgcgtgtgaagccccagggcctggttgtgacttccagtgccgtgtgcagctctcctgac
tacctccgagagcccaagtactaccccggcggccccccaaccccccggcccttgcttccc
acccgcccccctgccagcccacctgacaaggccttttccacccataccttctccgagaac
ccacgcccacccccacgtcgggaccccagctcccggcgtccaccagtccttgccaaggga
gacgacctgctaccccctcgggcagcccggcctgtctcccaggcccactgtcccacaccg
gccccagacaacaactccctccgtcactgggacaacgggcgtgtgaacctgcatccggtg
gtgcagctgattgacatcatgaaggacctgacacggctgtcccaggacctgcagcacagt
ggtgtgcatctagactgcggcgggctgcgactgagccgcccacccgctccaccgcccggc
gacctgcagtacagcttcttctcttcacccagcctggccaatagcatccgcagccctgag
gagcgtgcgacccctcacgccaagccagagcggcccaaccaccccctctatgaacctgag
cccgagcccagggatagtccccagcctggccaaggccatggtcctggagccacagccacg
gccactggtctgcccccagagcctgagccagatgggcctgactaccctgagctggcagac
gctgacatcctcagtgaacttgcctcccttacttgccctgaggcccagctcctggaggct
caagcccttgagcctccttcaccacagcctgagccgcagctcctggacccccagccccgc
ttcctagacccacaagcactagagcctctaggagaaggtttggaactaccacccctgcag
cctcttgcggatcctctgggactgccgagcttgactctgcaggccctagacaccctacct
gactccttggaatcccagctccttgaccctcaggccctcgaccccctgcccaagttgttg
gatgtccctggtcgacgtctagagccccagcaatccttgggacactgccaactggctgag
cccttacgcctggacttgtgctcacctcatggtccccctgggcctgagggccaccccaag
tacgccttgaggcgcactgataggccaaagatcctgtgtcgcaggcggaaagctggaagg
ggacggaaggtggattcaggacctgaaggtcgtctgctgcctcttcccatgcctacaggg
ctggcagctgccctggctgaacccccaccgctgcccccaccaccaccacctcctgctctg
tcaggcccagttcctgaactggagccagagtcctctcaaactccaatggtccccacccgc
aaaggcaagtgcaggggagtgcggcggatggtggtgaagatggcaaagatccctgtgtca
ctagggcggaggaacaagaccacgtacaaagtttcatccttgagcagcagtctgagtgtg
gagggcaaggagctgggcctgagggtgtcgtcggagcccaccccattgctgaagatgaaa
aacaatggccggaatgtggtggtggtcttcccgccaggtgagatgcctattattctcaag
cgaaagcgtggccgccctcctaagaacctgctgctgggtcctggcaaacccaaagagcca
acagtggtagctgccgaggctgccgctgtgacagcggccaccatggccatgccggaggtg
aagaaacggcggcggaggaaacaaaagctggcatccccgcagccgtcctacgcagcagac
gccaatgacagtaaggctgagtattccgatgtccttgccaagctggcctttttgaaccgc
cagagccagtgtgctgggagatgctcgccaccccgatgctggacacccagtgagcctgag
tcagtgcaccaagccccggacactcagagcatctctcaattcctgcaccgggtgcagggc
ttccggaggcgtggaggcaagacaggaggctttggaggtaggggcggaggccatgcagcc
aaggcagcccgctgttcctttagtgacttttttgagggcattggcaagaaaaagaaggtg
gtagcagtggcagctactggggttgtgggtcctggtctcactgagctggggcatccacgc
aaaaggggccgaggcgaggtagatgctgtaactgggaaacccaagcgcaagaggcggtcc
cggaagaatgggactctgttcccagagcaggtgcccagtggcccaggctttggggaggcc
ggtgctgagtgggctggggacaagggtggtggctgggcccctcaccatgggcacccagga
gggcaagctggccgaaactgtggtttccaggggacggaggccagggcttttgcctccact
gggctggagagtggggcttcaggccgtggcagctactatgctggtgcaccctcaggccag
acggagctcagccaggaacgccaaaacctcttcactggctattttcggtccctgcttgat
tcagatgactcctctgacctcttggactttgccctatcggcctctcgcccagagtcccgg
aaggcatcgggcaactatgcagggcctccctccagtgcgctgcctgctcagcgggggctt
gccaccttcccaagccggggagccaagggtagcccagtggcagtgggcaacagtggagct
gggacagacccctccttccagcctgtcctgccttcccgtcagacctttccaccaggccgg
gcaacaagctatgggataaccccagccacttcagactgccgagcagctgagaccttccca
aagctggctccccctccttcagctgtggcccgctcgcctacaacccaccctcctgccaac
acctacccacctcagtatggtggctatggggcaggacaaagtgtgtttgccccagcaaag
cccttttcaggccaggactgtgctaatagtaaggactgcagctttgcctatggcagcggc
aatagccttcctgcctcacccagcagcgcccacagtgctggctatgccccgccgcctact
gggggtccctgtctaccgcccagcaaggcctccttcttcaacagctctgaggggggcccc
ttctctgggtcagctcccacacccttgcgctgtgacagtcgagccagtactgtctcaccc
ggtggctacatggtacccaagggcaccacagcttctgctgcctctgcggcctcctcctct
tcctcttcctttcagccctcacctgagaactgtcggcagtttgtgggggcttctcagtgg
cctttccggcaggggtatggaggcctggactgggcctcggaggcctttagtcagctctac
aatcccaactttgactgccacgtcagtgaacccaatgtgatcttggacatctcgaactac
acgccacagaaggtgaagcagcagactgctgtgtccgagaccttctccgagtcatcctct
gacagcacccagttcaatcagccagttggtggtggttttaggcgtgccaacagtgaggcc
tcaagcagtgagggccagtcaagcctgtccagcctggagaagctcatgatggactggaat
gaagcatcatctgctcccggctacaactggaaccagagcgtcctctttcagagtagctca
aagcctggccgtggccggcggaagaaggtggacctgtttgaggcctcacatttgggcttt
tcaacatccacctcagccactgcctctgggtatccgtccaaacggagcaccggaccccgg
cagcctcggggtggccggggtagtggggcctgctcagccaagaaggagagaggtggtaca
gcggccaaagccaagttcatccccaagccacaaccagtgaatccactgttccaggacagc
ccagaccttggcctggactactatagtggggacagcagcatgtcaccactgccctcccag
tcgagagcctttggtgtgggagaacgagatccctgtgacttcatgggaccttactccatg
aatccatccacaccttctgatggcacttttggccaaggcttccactgtgactctcccagc
ctgggtgctcctgaccttgacagcaagcatttcccaccactggcccacccacccacagtg
tttgatgctggcctgcagaaggcctactcacccacctgttcaccgacactaggcttcaag
gaagagttgcggccaccaccttcaaagctgactgcctgtgagcccctcaagcatggtctt
cagggggctagcctgagtcatgcagcccaggcccacctgagctgccgggacctaccgcta
ggccagcctcactatgagtcccctagttgcaagggtacagcctattggtacccaccaggt
tcagctgcccgcagcccaccttatgaaggcaaggtgggttcagggctgctggctgacttc
ctgggcaggacggaggctgtctgcctcagtgcccctcacctggctagcccaccagccacg
cccaaggccgacaaggagccattggagatgacccggcccccaggtccaccccgtggccct
gctgcagccactgctggctatggctgcccactccttagtgacttaactctgtcccctgtg
ccgagggactcgctgctgcccctgcaggacactgcctacaggtatccaggctttatgccg
cagacacaccctggcctgggtgggggtcctaagagtggcttcctggggcccatggcggaa
cctcaccctgaggacacatttaccgtcacctccctgtag

DBGET integrated database retrieval system