KEGG   Rattus norvegicus (rat): 362700
Entry
362700            CDS       T01003                                 
Symbol
Spast
Name
(RefSeq) spastin isoform 2
  KO
K13254  spastin [EC:5.6.1.1]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    362700 (Spast)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    362700 (Spast)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     362700 (Spast)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    362700 (Spast)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     362700 (Spast)
SSDB
Motif
Pfam: AAA AAA_lid_3 Vps4_C RuvB_N AAA_5 AAA_22 TIP49 MIT AAA_14 TniB AAA_16 Mg_chelatase IstB_IS21 DUF815 AAA_24 nSTAND3 AAA_2 DUF4368
Other DBs
NCBI-GeneID: 362700
NCBI-ProteinID: NP_001102172
RGD: 1308494
Ensembl: ENSRNOG00000027136
UniProt: B2RYN7
Position
6:complement(26807220..26858456)
AA seq 581 aa
MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYFSYPLVVGFA
LLRLLACHLGLLFVWLCQRFSRALMAAKRSSGTAPAPASPSTPAPGPGGEAESVRVFHKQ
AFEYISIALRIDEEEKGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMMT
NLVMAKDRLQLLESGAVPKKKDPLTHASNSLPRSKTVMKSGSTGLSGHHRAPSCSGLSMV
SGARPGSGPAATTHKGTSKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDN
GTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAV
AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH
DASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRL
LLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSAS
EMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgagttctccggccggacgacggaagaagaaaggctcaggcggcgcgagccccgcgccc
gccaggcctccgccccccgccgcggtccccgcccctgccgccggcccggcccctgcgccc
ggctcgccgcataagcggaacctgtattacttctcgtatccgctggtcgtcggcttcgcc
ctgctgcgcctgctggcctgccacctggggctcctcttcgtgtggctctgccagcgcttc
tcccgcgccctcatggccgccaagaggagctccgggaccgcgccggcgcccgcctcgccc
tcgactccagcccccggaccgggtggcgaggccgagagcgtccgcgtcttccacaagcag
gcctttgagtacatctccattgccctgcgcatcgacgaggaagagaaaggacagaaggaa
caagctgtggaatggtataagaaaggcatcgaagaactagagaaaggaatcgcggttata
gttacgggccaaggtgaacagtacgaaagagctagacgccttcaagccaaaatgatgacg
aatttggttatggctaaggaccgtttacaactcctagaaagtggagcagttccgaagaag
aaagaccccttaacacatgctagtaattcattgcctcgatcaaaaactgtcatgaaaagt
ggatccacagggctctccggtcaccacagggcgcctagttgcagtggtttatccatggtt
tctggagcaagaccgggatctggtcctgcagctaccacacataagggtacttcaaaacca
aatagaaccaacaaaccttctacacccacaactgcagttcggaaaaagaaagacttgaaa
aattttaggaatgtggacagcaatcttgctaaccttataatgaatgaaattgttgacaat
gggacagctgttaaatttgatgatatagctggtcaggaactggcaaaacaagcattgcaa
gagattgtcattctcccttctctgcggcctgagttgttcacagggctcagagctcccgcc
agaggcttgttactcttcggtccaccaggaaacggaaaaaccatgctggctaaagcagta
gctgcagaatctaatgcgacttttttcaatataagtgctgcaagtttaacttcaaaatat
gtaggagagggagagaaattggtgagagctctttttgctgtggctcgagaacttcaaccc
tctataatttttatagatgaagttgatagtcttttgtgtgagagaagagaaggggagcac
gatgctagtagacgactaaaaactgaatttttaatagaatttgatggtgtgcagtctgct
ggagatgacagagtcctcgtaatgggtgcaaccaacaggccccaagagctggatgaagct
gttctcaggcgtttcattaaacgggtgtatgtgtcattacccaatgaggagacacgacta
cttctacttaaaaacctgttatgtaaacaaggaagtccactgacccaaaaagaacttgct
caactggcgagaatgactgatggatactctggaagtgatctgactgctttggcaaaggat
gcagcactgggtcctatccgagaactgaaaccagagcaggtgaagaacatgtctgccagt
gagatgagaaatattcgattatctgacttcacagaatccttaaaaaagatcaaacgcagt
gtgagtcctcagactttagaagcatacatacgctggaacaaggactttggagacaccact
gtttaa

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