KEGG   Rattus norvegicus (rat): 362701
Entry
362701            CDS       T01003                                 
Symbol
Capn13
Name
(RefSeq) calpain-13
  KO
K08581  calpain-13 [EC:3.4.22.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    362701 (Capn13)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   362701 (Capn13)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_7 EF-hand_1
Other DBs
NCBI-GeneID: 362701
NCBI-ProteinID: NP_001020304
RGD: 1562682
Ensembl: ENSRNOG00000032375
UniProt: Q5BK10
Position
6:27823664..27918676
AA seq 668 aa
MAHDTEALEETSVVKFKNQDFRFLRDRCLSRGQLFIDDTFPAEASSIGQKLLMGKRLPKL
EWKRPQDLSFGPPHFILEGASRFDIQQGRAGDCWFLAALGSLTQNPQCLQKILMNQSFSY
QYAGIFHFRFWQCGQWVEVVIDDRLPVVGNNFCFVHPRRGNQEFWPCLMEKAYAKLLGSY
SQLHYGYLPDALVDLTGGVVTRINLHSSPSDLLMVVKTAVQTGSMVACATPKWLTEESEV
MENGLVSQHAYTVTGAEKIQYRRGWEEIIRLWNPWGNTEWRGRWGDGSQEWWETHGSRKS
QLYENKDDGEFWMSCRDFHENFSCLYICSQFPITMDPGVTPNESWRQMRFKNQVISGNTA
GGDGRDIQYLFDVQEPMDGNNVIVAFTVMPQSLKTEEWPFPLQFQVFKVDSQFQKFQKRL
PPAFFSQFRDAAQGIDYVTKRNFTKSFHLSPGTYVVVASAHGKEVEFLLRIFLKMPHKDR
NPNSSFNLKALKGSLSENESPKSSFHRYMDQGLDIDASQLQSLLNQEYLTGPPGDTFSLD
QCQSIMALMDLKVNGRLDREEFARLQSRLIHCQHVFQHIQRSQGVLRSSDLWEVIESTDF
LSGVLLSKELLSLMTLRYSDSSGRLSFPSLVCFLIRLETMSKAFRNLSKDGKSIYLTEME
WMKLVMYS
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcacatgacacagaggctctagaagaaacctccgtggtcaagttcaagaaccaggac
tttagattcttacgggatcgttgcctgagcaggggtcagctgtttatagatgatacattc
cctgctgaggcatcttccattggccagaaactgctcatgggaaagcgccttccaaaattg
gagtggaagcgaccacaggatttatccttcggcccccctcacttcattctggaaggtgca
agcagatttgacatccaacaaggaagagcgggagactgctggttcctggcagcactgggt
tctctgacccagaacccgcagtgtctgcagaagatcctgatgaaccaaagcttttcgtac
cagtacgctgggattttccacttccggttctggcagtgtggtcagtgggtggaagtagtc
atcgatgaccgcttgcctgtcgtaggcaacaacttctgctttgtgcatcctcgcagaggc
aaccaagaattctggccctgcctgatggagaaagcctatgccaagctgctaggctcatat
tcccaattacactatggctaccttcctgatgcgctggtggacctcacaggaggagtggtc
accaggatcaacctgcactcctctccctctgacctattgatggtagtgaagaccgcagtc
cagacaggctcaatggtggcctgtgccaccccaaagtggctgacagaagagtccgaggtt
atggagaatgggctggtgagccagcatgcatacacagtgactggagctgagaagattcag
taccggaggggctgggaagaaatcatccgcctttggaacccctggggcaacacagaatgg
agaggccgctggggagatgggtcccaggagtggtgggaaacccatggctcacggaaaagc
cagctgtacgagaataaggatgacggcgagttttggatgtcctgtcgagatttccatgag
aacttctcgtgcctgtacatatgtagccagttcccgatcactatggatcctggagtcaca
cccaatgagagctggcgacaaatgaggtttaagaaccaagtgatctcaggaaacacagca
ggaggagatggaagggatatacagtacctctttgacgttcaagagcccatggatggtaac
aatgtcattgtggctttcacagtcatgccacaaagcctgaagacagaagagtggccattt
ccactacagttccaggtgttcaaggtggattcccagttccagaagttccagaaaagactg
ccacctgcatttttctcccaattcagagatgctgcccagggaatagactatgtaaccaaa
cgcaacttcacaaagtccttccacctgagtcctgggacctatgtagtggttgcctcagca
cacgggaaagaagtggagttcctgctccgaatattcctcaaaatgccacacaaggacagg
aatccaaacagcagtttcaacctcaaagccctcaagggaagtctttcagaaaacgaatcc
ccaaaaagcagtttccacagatatatggatcaggggctagacattgatgccagccaactt
cagagccttctcaaccaggagtacctaacagggcccccaggggacactttctccttggac
cagtgccaaagcatcatggcactgatggatctgaaagtgaatgggcggctggatcgggag
gagtttgcaagactacagagtcgcctgatccactgccagcatgttttccagcacatccag
aggagccaaggagttctccgcagctcggacttatgggaggtcatagagagtacagacttc
ctttcaggagtcctcctcagcaaggagctgctgagtcttatgacactcaggtacagtgat
agctctggccggctcagctttcccagtcttgtctgcttcctgatacggctggaaaccatg
tcaaaggcattccgcaacctctccaaggatggcaaaagcatctacctgacagaaatggag
tggatgaagctggtcatgtacagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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