KEGG   Rattus norvegicus (rat): 362814
Entry
362814            CDS       T01003                                 
Symbol
Rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1 isoform 1
  KO
K11981  E3 ubiquitin-protein ligase NRDP1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    362814 (Rnf41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    362814 (Rnf41)
   04121 Ubiquitin system [BR:rno04121]
    362814 (Rnf41)
   03029 Mitochondrial biogenesis [BR:rno03029]
    362814 (Rnf41)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     362814 (Rnf41)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    362814 (Rnf41)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    362814 (Rnf41)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    362814 (Rnf41)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    362814 (Rnf41)
SSDB
Motif
Pfam: USP8_interact Sina_ZnF zf-TRAF Trimer_CC zf-TRAF_2 Sos7 ATG17_like LXG TMF_DNA_bd DUF641 SlyX Rootletin DUF4795 BLOC1_2 zf-C3HC4_4
Other DBs
NCBI-GeneID: 362814
NCBI-ProteinID: NP_001387996
RGD: 1309557
Ensembl: ENSRNOG00000023456
Position
7:1422651..1461700
AA seq 317 aa
MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVV
TVAHLRPVPRIMRNMLSKLQIACDNAVFGCSAVVRLDSLMSHLSDCEHNPKRPVTCEQGC
GLEMPKDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAI
RSVNPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPA
SIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDM
VQEPGLVMIFAHGVEEI
NT seq 954 nt   +upstreamnt  +downstreamnt
atggggtatgatgtaacccggttccagggggacgttgacgaggacctcatctgccctatt
tgcagtggagtcttggaggagccagtacaggcgcctcattgtgagcatgccttctgcaac
gcctgcatcacccaatggttctctcagcagcagacgtgtccggtagaccgtagcgttgtc
acggttgcccacctgcgcccagtgcctcggatcatgcggaacatgttgtcaaagctgcag
attgcctgtgacaacgctgtgtttggctgcagtgctgttgtcaggcttgacagcctcatg
tcccacctcagtgactgtgagcacaacccgaagcggcctgtgacctgcgagcagggctgc
ggcctggagatgcccaaagatgagctgccaaaccacaattgcattaagcacctgcgctcc
gtggtccagcagcagcagacgcgcatcgcagagctggagaagacatctgctgaacacaag
caccagctggcagaacagaagcgagacattcagttgctgaaggcgtatatgcgagccatc
cgcagtgtcaaccccaaccttcagaacctggaggagacaatcgagtacaacgagatcctt
gagtgggtgaactccctacagccggcaagagtgacgcgctggggggggatgatctccact
cctgacgctgtgctgcaggctgtaatcaagcgctccctcgtggaaagtggctgcccagct
tctatcgtcaacgagctgatcgaaaatgcccatgaacgcagctggccccagggtctggcc
acactagagacaagacagatgaaccggcgctactatgagaactacgtggccaagcgcatc
cctggcaagcaggctgtggtggtgatggcctgcgagaaccagcacatgggtgacgacatg
gtgcaggagccggggctggtcatgatctttgcacatggtgtggaggagatttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (19)   
   UniProt (1)   
   RefSeq(pep) (18)   
DNA sequence (20)   
   RefSeq(nuc) (18)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (68)   

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