KEGG   Rattus norvegicus (rat): 362825
Entry
362825            CDS       T01003                                 
Symbol
Hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
  KO
K24650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362825 (Hmg20b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    BRAF-HDAC complex
     362825 (Hmg20b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 DASH_Duo1 Caudo_TAP
Other DBs
NCBI-GeneID: 362825
NCBI-ProteinID: NP_001102201
RGD: 1309235
Ensembl: ENSRNOG00000020601
UniProt: A6K887
Position
7:9019670..9024382
AA seq 318 aa
MSHGPRQPGAATAPAGGKTPGQHGAFVVAVKQERSEGPRAGEKGPQEEEPVKKRGWPKGK
KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYL
DEAEKEKQQYLKELWAYQQSEAYKVCTEKIQENKIKKEDSSSGLMNTLLNGHKGVDCGDG
FSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMNSARERLEQELA
LEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHE
RLIARVKEILARVASEHL
NT seq 957 nt   +upstreamnt  +downstreamnt
atgtcccacggtccccggcagccaggcgcagccaccgcacctgcgggaggcaagactccg
ggccagcatggggcctttgtagtggctgtcaagcaggagcgcagcgaaggtccccgtgcc
ggagagaaggggccccaggaggaggagccagtgaagaagcgaggctggcccaaaggcaag
aaaagaaagaagattctccccaatgggcccaaggccccggtcacgggctatgttcgcttc
ctgaacgagaggcgggagcagattcgcacccgacatccggaccttcccttcccggagatc
accaagatgttgggcgcggagtggagcaagctgcagccagcagagaagcagcggtacctg
gatgaggcagagaaggagaaacagcagtacttgaaggagctgtgggcataccagcagtca
gaggcctacaaggtctgcaccgagaagatccaagaaaacaaaataaaaaaagaggactcc
agctctgggctcatgaacaccctcctgaatggacacaagggtgtggactgcggcgatggc
ttttcaacctttgatgttcccatcttcactgaagagtttttggaccaaaacaaagcacgc
gaggcagagctgcggcgcctgcggaagatgaacgtggctttcgaggagcagaacgcagtg
ctgcagcgccacactcagagcatgaacagcgctcgtgagcgtctggagcaagagctggcg
ctggaggagcggcgcacgctggcgctgcaacagcaactgcaggctgtgagacaagcgctc
acggctagtttcgcctctctgccggtgcccggcaccggggagacgccgacgctcggaacg
ctggacttctacatggcgcggcttcacggagccatcgagcgcgacccggcgcagcacgag
agactgatcgcgcgcgtcaaggagatcctggcgcgagtagccagcgagcacctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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