KEGG   Rattus norvegicus (rat): 362842
Entry
362842            CDS       T01003                                 
Symbol
Syde1
Name
(RefSeq) rho GTPase-activating protein SYDE1
  KO
K20655  Rho GTPase-activating protein SYDE
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    362842 (Syde1)
Membrane trafficking [BR:rno04131]
 Others
  Rho GTPase associated proteins
   Rho GTPase-activating proteins
    362842 (Syde1)
SSDB
Motif
Pfam: RhoGAP
Other DBs
NCBI-GeneID: 362842
NCBI-ProteinID: NP_001178805
RGD: 1305857
Ensembl: ENSRNOG00000007307
UniProt: D3ZZN9
Position
7:11683505..11689491
AA seq 735 aa
MAEPLLRKTFSRLRGREKLPRKKSDAKDRGRPAQRSEPKPPEPEPRVLEGSQAGAEVPLS
PETPRSPARGAYLQSLEPSSRRWVLGGAKPPEEISLGPRTPSSGEPAGEIWYNPIPEEDP
RPPAPEPVGSQLASSEPEGPILQGAAPTSPPTKTSRTKSPGPARRLSMKMKKLPELRRRL
SLRSTRTSRERERTAPAGSVISRYHLDSSVATPGQASVAGGTRSPRGGYLSDGDSPERPG
GPPSPTAFRPYEVGPSARAPPAALWGRLSLHLYGLGGLRPTPGATPRDLCCLLQVDGVAR
ARTGPLRSGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTIFRGC
QAQQLAVRLEPQGLLYAKLTLSEQQEAPATVEPRVFGLPLQLLVEREQSPGQVPLIIRKC
VGQIECRGLRVVGLYRLCGSAAVKKELRDAFEQDSAAVCLSEDVYPDINVITGILKDYLR
ELPTPLITQPLYQVVLEAMAQGHPSRASLGPEGTRGLLSCLPDVERATLTLLLDHLRLVS
SFHTHNRMTPQNLAVCFGPVLLPARQTPSRTRLRGSGPGVSSAVDFKRHIEVLHYLLQSW
PDTRRPSETPDVAPYLRPKRQPPLHLPLDGPEVVTRPRGRGGPESPPSNRYAGDWSVCGG
DLLPRGRDFLSGPDYDHVTGSDSEEDEDESGEPRGTTDFEDEFDAPFNPHLNLKDFDALI
LDLERELSKQINVCL
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggccgagccgctgctcaggaagaccttctcccgcttgcggggtcgggagaaacttccc
cggaaaaagtcagatgccaaggaccgcggccgcccagcccagcgctcagagcccaaaccc
ccagaaccagaacctcgcgtccttgaagggtctcaggctggagcagaggtaccactcagc
cccgagacacctcggagccccgctcgcggtgcctacctgcaaagcctggagcccagtagc
cgccgatgggtgctaggaggggctaaaccaccggaggagatatctttagggcctaggaca
cctagcagtggggagcctgctggtgagatttggtacaaccccatccctgaagaagacccc
agacctccagcacctgagcccgtgggatcgcagctagcttcctctgagccagaaggcccg
atcctccaaggtgcagcccctaccagcccccctaccaaaacctcccgtaccaagtcccca
ggccctgcaaggcgcctctctatgaagatgaaaaagcttccagagctgcgccgccgcctg
agcctaagaagtactcgcactagcagggaacgagagaggaccgccccagcaggctctgtc
atcagccgctaccacctggacagcagtgtggcgactcctgggcaggcatcagtggctgga
gggactaggagcccaaggggtgggtacctcagcgatggtgattcgccggagcgtcctggg
ggaccaccatcacccactgccttccggccctatgaagtgggcccatcagcccgggctcct
ccagccgcgctctgggggcgtctcagcctgcacctgtatgggctagggggtctgcggcca
actccgggggctactcctcgtgatctctgctgtcttctccaagtggatggagtagctcgg
gcccgcacagggccacttcgaagcgggccagacttcctgaggctggatcacaccttccac
ttggagctggaggccgctcggctgctgcgggccttggtacttgcgtgggaccctggtgtg
aggcggcaccggccctgtgcccagggcactgtgctactgccaaccatctttcgagggtgc
caagcgcaacaactggccgttcgactggaaccccagggacttctgtatgccaagctaacg
ttgtcggaacagcaagaagcccctgccacagtggagccccgtgttttcgggctcccgctg
cagcttctggtagaacgtgagcagtctccaggccaggtgcctctcatcatccgaaagtgt
gtggggcagatcgagtgccgagggctgcgggtcgtggggctgtaccgtctctgtggctca
gccgcggtgaagaaagagcttcgagatgcctttgagcaggacagtgcagctgtgtgcctc
tctgaagatgtgtaccccgatatcaatgtcatcacaggcatcctcaaggattaccttcga
gagctgccaacgccgctcatcacccagcccctctaccaggtggtgctggaggccatggcc
caaggacacccaagcagggcttccctgggtcctgaaggcaccagaggactcctcagctgc
ctgccagatgtggagagggccacactgacgcttcttctggaccatctgcgccttgtctcc
tccttccacacccacaaccgcatgaccccgcagaacttggcggtgtgcttcggaccggtg
ctgctgccagcgagacaaacaccctctcggacccggctccgtggctccggcccaggagtc
agcagcgctgtggatttcaagcgccacattgaagtcctgcattacttgttacagtcttgg
ccagatacccgccggccctcagagaccccagacgtcgcaccgtatttgcggcccaaacga
cagccaccgctgcacttgccgctggatggcccagaagtggtgactcggcctcggggccgt
ggaggccccgaaagtcccccaagcaaccgctatgcaggcgactggagcgtgtgcggggga
gatttactgccgcgtgggcgggacttcctgtccggacctgactatgaccacgtgacaggc
agcgacagtgaggaagatgaggatgagagtggagagccgaggggcactacggacttcgaa
gatgagtttgatgcacccttcaacccacacctgaatctcaaagactttgatgccctcatc
ctggatctggagagagaactttccaagcagatcaatgtgtgcctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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