KEGG   Rattus norvegicus (rat): 362892
Entry
362892            CDS       T01003                                 
Symbol
Mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 6
  KO
K26585  methyl-CpG-binding domain protein 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    362892 (Mbd6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362892 (Mbd6)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     362892 (Mbd6)
SSDB
Motif
Pfam: MBD
Other DBs
NCBI-GeneID: 362892
NCBI-ProteinID: NP_001164037
RGD: 1311050
Ensembl: ENSRNOG00000006209
Position
7:complement(64992877..65001274)
AA seq 1005 aa
MNGGNESSAADRAGGPAATAVPIGWQRCVREGAVYYISPSGTELSSLEQTRSYLLSDGTC
KCGLECPLNVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVAMATLYRSMETT
CSHSSPGEGASPQMFHTVSPGPASVRPSCRVPPTTPLNGGPGSIPQEPPSVPQAFPPLTG
PAGLFPPRLPDPVPSAGSSSPCFLPRGNAPSPAPPPPSAISLNAPSYNWGASLRSNLVPS
DLGSPPAPHASSSPPSDSPLFHCSDALTPPPVPPSNNLPGPPGPPGSTTQPPVSSATMHL
PLVLGSLGGGPTVEGPGAPPFLASSLLSAAAKAQQPQLPPPSTLQGRRPRAQAPSASHAS
PRPSQRRPRRPPTVLRLLEGGGPQSPRRSRPRAPAPVPQPFPLPEPSQPILPSVLSLLGL
PTPGPSHSDGSFNLLGSDAHLPPPPALSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAP
PAASKAPVVPSPVLQSPCDKGLGLGAGPACPLPPLAGEEAFPFPSPEQGLALSGAGFPGM
LGALPLPLSLGQPPPSPLLSHSLFGVLAGAGQPPPEPLLPPPGGPGPPLAPGEPEGPSLL
VASLLSPPPSDLLPPPAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPNGEPFSGLGDL
PPLLFPPLSAPPTLIALNSALLAASLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGA
SSLGKAPSNSGRPPQLLSPLLSASLLGDLSSLTSSPGTLPSLLQPPGPLLSSQLGLQLLP
GGGAPPTLSEASSPLACLLQSLQIPPEQPDAPCLPPESPASALEPEPARPPLSALAPPHG
SPDPPVPELLTGRGSGKRGRRGGGGLRGINGETRPGRGRKPGSRREPGRLALKWGTRGGF
NGQMERSPRRTHHWQHNGELAEGGAEPKDPPLPGPHPEDLKVSPGIVRKSRRGRRRKYNP
ARNSSSSSRQDVTLEPSPTTRAAVPLPPRARPGRPAKNKRRKLAP
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgaatggagggaatgagagcagtgcagcagacagagccgggggccctgcggccacggct
gtccccatcgggtggcagcgctgtgtacgagaaggtgctgtgtactatatcagcccaagt
ggcacagagctgtcttccttggagcaaacccgtagctacctcctcagcgatgggacctgc
aagtgcggtctggagtgtccactcaatgtacccaaggttttcaactttgaccctctggcc
ccggtgaccccgggtggggctggggtggggcctgcatcggaggaggacatgaccaagctg
tgcaaccacaggcggaaagctgttgccatggcaactctgtaccgcagcatggagaccacc
tgctcacattcttctcctggagagggagcaagcccccaaatgttccacactgtgtcccca
gggcctgcctctgtccgcccttcttgtcgagttcctcctacaactccacttaatgggggt
cctggctccattccccaagaaccaccttcagttccccaggccttccctcctctaacaggc
cctgcagggctcttcccaccccggcttcctgatccagttccttctgcaggcagcagcagc
ccttgtttccttccaagaggcaatgctccctctccagccccacctcctccatctgcgatc
agcctcaatgccccttcctacaactggggagcttccctccgatccaacctggtgccctct
gacctgggctctcctccagcccctcatgcctcctcttcaccaccttcagactctcctctc
ttccactgtagtgatgccttaacacctcctcccgtgcccccaagcaataatctccctggt
ccccctggtccccctggttccaccactcagccaccagtgtcttcagccactatgcacctg
cccttggtcctgggatccttgggagggggccccacagtggaggggcctggggcaccccca
ttccttgctagcagcctgctctctgcagcagccaaggcccagcaaccccagctgccccct
cccagcactttacagggccgaaggccccgtgcccaggccccctcagcttcccatgcatca
ccccgtccctctcagcggcgtcctcgccggcccccaactgtcttgaggttgctagaaggg
ggaggccctcaaagccctagacggagccgtcctcgggcccctgctcctgtccctcagccc
tttcctctcccagagccgtcccagcctattctcccctctgtgctgtccctactgggactc
cccacccctggcccttcccactcggatggaagctttaaccttttggggtcagatgcacac
cttcctcctcccccagccctctcctcagggagccctccccagcccaggcaccccattcag
ccctctctgcctgggaccaccagtggcagcctcagcagtgtgccaggtgcccctgcccca
ccagctgcctccaaagcccccgtagtccccagccctgtgcttcaaagcccatgtgacaaa
gggctggggttgggggcaggcccagcctgccctctgcctcccttggctggtgaagaggct
ttccctttccccagccctgagcagggcctggcgctcagcggagctggcttcccggggatg
ctgggggccttgcctctccctctgagtctgggacagcctccaccttctccattacttagc
cacagtttatttggtgtgctggctggggcagggcagcctcctcctgagcccctgctgccc
ccaccagggggacctggccctcccttagccccaggcgagcctgaagggccttcactcttg
gtggcttctctgctctcaccacccccttctgacctcctcccccctcctgcaccccctagc
aacctccttgcctcttttctgcccctgttggccctgggccccacagctggggatggagaa
ggatctgcagagggagctgggggtccaaatggggagccattttcaggtttgggagacctg
ccccccctactattccccccactttcagccccacccaccctcatagctttaaattctgcg
ctgctggctgccagcctggatcccccctcggggacacccccccagccctgtgtcctgagt
gccccccaacctggaccacctacctccagtgtcaccacggcaactactgacccgggggcc
tcctctctgggcaaggccccctccaactcagggagaccccctcaacttcttagccctctg
ctgagtgccagcctgctgggtgatctgtcttcactgaccagcagccctggaaccctcccc
agcctgttgcagcctcctggccctcttctttccagccagttaggattgcagctcctccct
ggggggggagcgcctcccaccctatcagaggcctctagtcccctagcctgcctgctacag
agtctccagatccctccagagcagccagacgctccttgtctgccccctgagagccccgcc
tcagcccttgaaccggagcctgcccggcctcccctcagtgccttagccccaccccatggt
tctcctgaccccccagtccctgagctgctcactgggagggggtcagggaaacggggccgg
aggggaggagggggacttaggggcattaacggtgagaccaggcctggcagaggccgaaag
ccgggcagccgccgagagcctggccggctggcactcaaatgggggacacgtggtggcttc
aatggacaaatggaacggtccccaagaaggactcaccattggcagcataatggggagcta
gctgaagggggtgctgagcccaaggatccaccccttcctgggccccatcctgaggacctt
aaggtgtccccggggatagtcagaaagtctcgtcgtggccggaggagaaaatacaaccct
gcccggaacagcagcagcagctcccgccaggacgttaccttggagcccagccctacaacc
cgagcggctgtccctctgcctccccgggcccgccctggacgtcctgccaaaaataagagg
aggaaactggccccatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (19)   
   RefSeq(nuc) (13)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (114)   

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