KEGG   Rattus norvegicus (rat): 362902
Entry
362902            CDS       T01003                                 
Symbol
Dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    362902 (Dcaf13)
   04121 Ubiquitin system [BR:rno04121]
    362902 (Dcaf13)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    362902 (Dcaf13)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     362902 (Dcaf13)
SSDB
Motif
Pfam: Sof1 WD40 eIF2A ANAPC4_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 362902
NCBI-ProteinID: NP_001167029
RGD: 1308458
Ensembl: ENSRNOG00000004301
UniProt: B0BN91
Position
7:72045828..72081039
AA seq 445 aa
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGCGEEEEPLYTVLGKTVYTGIDHHWKDPAFATCGQQVDI
WDEQRTSPVCSMNWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTRRMQHVICVKWTSDSKYILCGSDEMNIRLWKANASEKL
GVLTSRERAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMN
RRKHSKPGSVPVVSERKKHVVAVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggtgaaaatgctgagccggaaccctgacaactatgtccgcgaaaccaagctggac
atacaaagagttccaagaaactacgatcctactttacatccttttgaagtcccaagagaa
tatgtaagagctttaaatgctaccaagttggaacgggtgttcgcaaaaccattccttgct
tccctggatggtcaccgtgatggagtcaattgcctggccaagcatccaaagagcctggct
actgttctttctggggcgtgtgatggagaggttaaaatttggaacctgactaaacgaaaa
tgtatccgaacgatacaagcacatgaaggttttgtccgaggaatatgcactcgcttttgt
ggaacttctttttttactgtcggagatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctgcggagaggaggaggaaccgttgtacacggtgttaggaaagacagtatatact
ggcattgatcatcactggaaagacccggcctttgccacgtgtggacagcaagtagacatt
tgggatgaacaaagaaccagccctgtgtgctcaatgaactggggatttgacagtataagt
agtgttaaatttaaccctattgagacatatctcttgggaagttgtgcttctgataggaat
atagtactgtatgatatgcggcaagctactcctttgaaaaaggttatcctagatatgaga
acaaatacaatctgttggaaccctatggaagctttcaattttactgcagccaatgaagac
tataacttgtatacttttgatatgcgtgcactggacactcctgttatggtccacctggat
catgtatctgcagtgcttgatgtagactactctccgactgggaaggaatttgtgtctgct
agttttgataagtctattagaatcttccctgtggacaaaagccgaagcagggaagtgtat
catacgaggcgcatgcagcatgttatttgtgtgaaatggacttctgacagcaagtacatt
ctgtgtgggtctgatgagatgaacatccggctgtggaaagccaatgcctctgaaaaattg
ggtgtgcttacatcacgagaaagagcagcaaatgattataaccagaagttaaaggaaaaa
tttcagtaccatccacatgtgaaacggattgctcgccaccgacatctgccaaaatctatc
tacagccagattcaggagcagcgtgttatgaaggaggctcgtcgccgcaaggaaatgaat
cgtcgtaaacatagcaagcctggatctgtgccagttgtgtcagagaggaagaaacacgta
gtggcggttgtgaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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