KEGG   Rattus norvegicus (rat): 362981
Entry
362981            CDS       T01003                                 
Symbol
Hdac10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform 2
  KO
K18671  histone deacetylase 10 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    362981 (Hdac10)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    362981 (Hdac10)
  09165 Substance dependence
   05034 Alcoholism
    362981 (Hdac10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    362981 (Hdac10)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     362981 (Hdac10)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     362981 (Hdac10)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 362981
NCBI-ProteinID: NP_001030172
RGD: 1305874
Ensembl: ENSRNOG00000031915
UniProt: Q569C4
Position
7:complement(122078768..122084457)
AA seq 588 aa
MGTALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEEL
GLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTG
AVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQ
YIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLA
AFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICAV
LECPGVYPECSDSPDPSLDKPPTNSTCTVAEDSLSPCLDRPCHRPTPPICIAVALAVSGA
ALDLPPGVLHQEGSALREETEAWARLHKSQFQDDDLAALGKSLCLLDGILDGQIRSAIAT
TTALATAATLGVLIQRCVAHRGQRRILWLSIRGKEADIWSMFHFSTPLPQTTGGFLSFIL
GLVLPLAYGFQPDMVLMALGPAHGLQNAQAALLAAMLRSPVGGRILALVEEESILQLART
LAQVLHGETPPSLGPFSMASPEEIQALMFLKAQLEPRWKLLQVAAPPP
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgggcacagcacttgtgtaccacgaggacatgacagccacccgactgctctgggatgac
cctgagtgcgaaattgagtgcccagagcgcctgacagctgccttggatggcctgcggcag
cgtggcctggaagaaaggtgccagtgtttgtcagtttgtgaggcatcagaggaagagttg
ggactggtgcacagcccagaatatatagccctggtgcagaagacccagaccctggacaaa
gaggagctccacacactgtctaagcagtatgatgctgtctacttccacccggatactttt
cactgtgcaaggctggcagcgggggctgcactgcggctggtggatgctgtgctaacagga
gctgtgcacaatggcgttgccctggtgaggcctccagggcaccatagtcagagggcggct
gccaatggcttctgtgtgttcaacaacgtggctatagcagccagacatgccaagcagaaa
tacgggctgcagaggattctcattgtcgactgggatgtccaccatggccagggcatccag
tatatctttgaggatgaccccagtgtcctttatttctcctggcaccgctatgagcatgga
aacttctggccgttcctcccagagtctgatgcagacacagttggccgagggcggggccaa
ggtttcactgtcaatttgccctggaaccaggttgggatgggaaatgctgactatttggct
gccttcctgcatgtgctgctcccgttggcctttgagtttgaccctgagctggtgctggtg
tcagctggattcgactctgctattggggaccctgaggggcagatgcaggccacccctgag
tgctttgcccatcttacacagctgctacaggtgctggctggtggccggatttgtgctgtg
ttggagtgccctggagtctatccagagtgttcggacagcccagacccctcactggacaag
cctccaacaaattccacatgtacagtagcagaggattcactgagcccctgcctggacaga
ccgtgccaccgccctacgcccccaatctgcatagctgttgccttggctgtgtcaggtgct
gccctggacttacctcctggagtgctccatcaagaagggtcagccttgagggaggagacc
gaggcatgggccaggcttcacaagtcccagtttcaggacgacgatcttgccgcactgggg
aagagtctgtgcctcttagatggaatcctggatgggcagataagaagtgctatagcaacc
acaactgcccttgccacagcagcaactttgggtgtgctcattcagcgatgtgtagcccat
agaggtcagaggagaattctgtggctcagcatccggggcaaggaggcagacatctggtcc
atgttccacttctccactccactgccacagacaactggagggtttctgagcttcatcttg
ggtctggtactgcccttagcctatggcttccagcctgacatggtgttgatggccctgggg
cccgcccatggcctgcagaatgcccaagctgctctcttggctgcaatgcttcggagccca
gtagggggccgaattctagctttagtggaagaggaatccatactccagcttgcaagaacc
ctggcacaggtattgcatggagaaacacctcccagtctgggccctttctcgatggcatct
ccagaggagatccaggcccttatgtttctaaaagctcagctggagcctcggtggaagttg
ctgcaggtggctgctcctccaccataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (16)   
   RefSeq(nuc) (14)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system