KEGG   Rattus norvegicus (rat): 363126
Entry
363126            CDS       T01003                                 
Symbol
Nphp3
Name
(RefSeq) nephrocystin-3
  KO
K19360  nephrocystin-3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    363126 (Nphp3)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   363126 (Nphp3)
SSDB
Motif
Pfam: TPR_12 TPR_10 TPR_1 TPR_7 TPR_8 TPR_2 TPR_16 TPR_MalT TPR_19 TPR_17 TPR_11 14-3-3 DUF2225 AAA_16 KAP_NTPase AAA_22 NACHT AAA_19 FliD_C AAA_14 TPR_6 TAtT
Other DBs
NCBI-GeneID: 363126
NCBI-ProteinID: NP_001178811
RGD: 1563856
Ensembl: ENSRNOG00000048978
Position
8:113500708..113541179
AA seq 1325 aa
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAGAGPGSLPRAA
GAGGLLGASFKSTGSSVPELEYAAAEFERLKKEYEIFRVSKNQELLSMGRREAKLDTENK
RLRAELQVLQKTYQKILREKEGALEAKYQAMERAVTFEHDRDRVKRQFKIFRETKENEIQ
DLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNGADVTAAGTQCEYWASRALGSEHSID
SMIQLQQPFRGPEFAHSSIDVEGPFANINRDDWDAAVAGLLQATPLFSHSLWCHPVRCYL
IYSEETQPEMELFLKDHSPKLKRMCETMGYFFHAVYFPIDVENQYLTLRKWEIEKSSLVI
LFLHSTLPSFLLEDCEEAFLQNPEGKLRLIYHRLEDGKATSDSVQRLLDQVSNLSETTKA
KIIEHSGDLSEGVYKIYMGVEKIIKQDILGLENTDVEVKDGGSEDSSPEEDDFGDVLWDV
HDEQEQIEAFQRASSSAHELGFEKYYQRLDDLVVAPAPIPPLLVSGGPGSGKSLLLSKWI
QLQQKHFPNTLILSHFVGRPMSSSSESSLIIKRLTLKLMQHFWAVSALTLDPAKLLEEFP
HWLEKLSARHQGSIIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPTAWRLW
PTLHLDPLSPKDAISMITAECHSVDVQLNREQEKMLEQHCRPATTRHALYVTLFSKMLAC
AGRAGDLAETLHRCLQCQDTMSLYRLVLHHVRESMPSDKEKEWMTQILCLINVSHNGVSE
SELMELYPEMSWASLTSIVHSLHKMHLLTYSCGLLRFQHLQAWETVRQAYMEDPALVSSY
RQKLIDYFTSQLSQDRVTWRSADELPWLFQQQGSKQKLHSCLLNLFVSQNLYKRGHFAEL
LSYWQFVGKDKSAMATEYFESLKQYENCEGEENMLCLADLYETLGRFLKDLGLLSQAVVP
LQRSLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFSDAEQLYKQALEISENAYGADHPH
AARELEALATLYHKQNKYEQAERFRKKSVIIRQQATRRKGSLYGFALLRRRALQLEELTL
GKDKPENARTLNELGVLYYLQNNLETAEQFLKRSLEMRERVLGPDHPDCAQSLNNLAALC
NERKQYARAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKTGRVDKAVPLYELAVE
IRQKSFGPKHPSVATALVNLAVLHSQMKKHSEALPLYERALKIYEDSLGRMHPRVGETLK
NLAVLSYEEGNFEKAAELYKRAMEIKEAETSLLGGKAPSRQSSSGDTLLFKTTHSPNVFL
PQGQS
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgggcacagcctcgtcgttggtgagccccgctggtggggaggtgatcgaggacacgtac
ggggcaggcggcggcgaggcctgcgagatcccggtggaagtgaagcccaaggctcgcctg
ctgcgtagctcgttccgcaggggcgcgggagccgggcccgggtcgctgcctcgggcggcg
ggggccggcgggctgctgggcgccagcttcaagtccaccggctcgtctgtgcccgagcta
gagtatgcggcggccgagttcgagcggctcaagaaagagtacgagatcttccgggtcagc
aagaaccaggagttgctgtccatgggtcgccgagaggccaagctggacacggagaacaag
cggctgcgggcggagctgcaggtacttcagaaaacttaccagaagatacttcgggaaaaa
gagggtgcattagaagcaaaataccaagccatggagagagcagtcacatttgaacacgat
agagacagggttaaaaggcaattcaagatttttagggagaccaaagaaaatgaaattcag
gacttgctgagggccaagcgagagctggagagcaaacttcagaggctgcaggcccagggg
atccaggtgtttgaccctggggagtctgactccgatgacaacggcgccgatgtcactgct
gccggaacccaatgtgaatactgggccagcagagccctgggcagcgagcattccatagac
agcatgatccagcttcagcagcctttcagaggtcccgagtttgcccacagttccatagat
gtggaaggacccttcgcaaacatcaaccgagatgactgggacgctgctgtggctggttta
ttacaagccacccccttgttctcacattccctgtggtgtcacccagtcagatgttacctc
atctattcagaggaaacccagcccgaaatggaacttttccttaaggaccattcacctaaa
cttaaaagaatgtgcgagacaatgggatacttcttccatgctgtttattttccaatagat
gttgaaaatcagtaccttactctaagaaaatgggagattgagaagagttctttagttatt
ttattccttcactcgacattaccaagttttttactggaagactgtgaagaagcctttctg
caaaacccagaaggaaaactacgattaatctaccaccgtttggaggacgggaaagccact
tccgactctgtccagcggttactggatcaggtttctaacctaagcgagaccactaaagcc
aagataatcgaacactctggagatctctcagagggagtgtataagatttacatgggtgtg
gaaaagattatcaaacaggacatccttggcctcgagaacacagacgtggaggtgaaggat
gggggcagtgaggattccagtccagaagaagatgattttggggatgttctgtgggacgta
cacgacgagcaagaacagatagaagcctttcagcgggcttctagctccgcccacgaactg
ggatttgagaagtattaccagcgcctggatgatctggtggtggcgccagccccgatccca
ccactcctggtttctggaggaccaggttctggaaagtcccttcttttatcaaagtggatt
cagctgcagcagaagcatttccctaacactctgatcctgtctcattttgtggggaggcca
atgtcatccagctcagagtcctccttgattatcaagcgtctgactctgaagctgatgcag
cacttctgggcagtttctgcactgacgctggatcctgccaagctcctggaggaatttcca
cactggctggagaagctctccgctcggcatcagggcagcatcatcatcatcatcgactcc
atagaccaagttcagcaagtggagaagcacatgaagtggctgatcgaccccctgccggtg
aatgtcagagtcattgtttccgtgaatgtggagacctgccctaccgcctggaggttgtgg
cctactctgcatctcgaccctttaagccccaaagacgccatatctatgataacggcagaa
tgccactccgtggacgttcagttgaacagagaacaggagaagatgctagaacagcactgc
cgtccagccacgacccgccacgccctctacgtcacccttttcagcaagatgctggcctgt
gccgggagagcgggtgacttagctgaaacccttcatcgatgcctgcagtgtcaggataca
atgtcgctgtacagactcgttctccaccacgtccgggagtccatgccaagtgacaaggaa
aaagaatggatgacacagattctctgcctcatcaacgttagtcacaatggcgtgagtgag
tccgagctgatggaactgtatccagagatgtcctgggcctctttgacctccattgttcac
agtttacacaaaatgcacctgctgacctacagctgtggcctgctcaggtttcaacatcta
caggcctgggaaacagtgaggcaggcgtacatggaagaccccgccctcgtttcctcttat
aggcaaaagctgattgactattttacctcacagctcagtcaggacagagtgacctggaga
agcgcagatgagctcccgtggctgttccagcagcaggggagcaaacagaagctgcacagc
tgcctcctcaatctcttcgtgtctcagaacctctacaaaagaggacacttcgccgagttg
ctgagttactggcagtttgttggcaaagacaaaagcgccatggcgaccgagtactttgag
tcactgaagcagtatgagaactgcgagggcgaggagaacatgctgtgcttagccgacctg
tacgaaactctcggccggtttctcaaggacctaggacttctcagccaggccgtggtgcct
ttgcagaggtccctagaaattcgggagacagccttagatcccgatcacccgagagtagcc
cagtccctccaccagctggccggtgtgtacgtgcagtggaagaagttcagcgatgccgag
cagctgtacaaacaggccctggagatctcagagaacgcctacggtgcggaccatccacac
gctgcccgtgaacttgaggcgcttgcgactttgtaccacaaacaaaataagtatgaacaa
gctgaacgttttaggaaaaagtcggttataatccgtcagcaagcgacgaggcgaaaaggc
agtctgtacgggtttgccctactacgcaggcgggctctgcagttggaagagctcacctta
ggcaaggacaagcccgagaatgcccgcaccctcaacgaactgggtgtcctctactacctt
caaaacaatcttgagacagcagagcagtttctgaagcgctccctggaaatgagggagcgg
gtcctgggaccagatcatccagactgcgcgcagtccctgaataacctggccgcgctgtgc
aatgaaaggaagcagtacgctagagcagaggagctgtatgagcgagccctggacatccgg
aggcgagcgctggctcctgaccacccttccctggcctacacagtgaagcaccttgcaatc
ttgtataagaaaacgggaagagttgacaaagctgtacctctgtatgaattggctgttgaa
attcggcagaaatcctttggcccaaagcaccccagtgtagccactgccttggtaaacttg
gcagtccttcatagccaaatgaaaaagcacagcgaagccctgccgctctatgaaagagcc
ttaaagatttacgaagatagcttgggacggatgcatcctagagttggagaaacattaaaa
aacttagctgtgctcagctatgaagaagggaattttgaaaaggctgctgaactgtacaaa
agggcgatggaaattaaagaagcagagacatcacttttgggtggaaaagctccttcaagg
cagtcatcaagtggagacacgcttctctttaaaacaactcattctcctaacgttttcctt
ccccaaggacaaagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system