KEGG   Rattus norvegicus (rat): 363235
Entry
363235            CDS       T01003                                 
Symbol
Als2
Name
(RefSeq) alsin
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    363235 (Als2)
   05022 Pathways of neurodegeneration - multiple diseases
    363235 (Als2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    363235 (Als2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    363235 (Als2)
SSDB
Motif
Pfam: RCC1 MORN VPS9 RCC1_2 RhoGEF PH
Other DBs
NCBI-GeneID: 363235
NCBI-ProteinID: NP_001013431
RGD: 1310372
Ensembl: ENSRNOG00000023280
UniProt: P0C5Y8
Position
9:complement(68107310..68180192)
AA seq 1651 aa
MDSKKKSSAEAEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAA
GQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPPQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAEKHASTVTSPHPETLDGQGEVFENTVAEAELN
MGSDQTTSGSAISAQQNIVGMAEVSSARTAPSYPDTQTVTAYLQKLSEHSVKENHEREEK
LPQVQPLVEEAVPDLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYS
TAPCEPGAPSGTASTGPESLKDLREEQVKQESLQGKKSSSLMDIREEESEGGSRRLSLPG
LLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLP
RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKV
SSESGVWSVAAGHGYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSK
LGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLEHL
GTVTTVQLLQEVASRFSKLCYLIGQHGASLSSYLQGMKEARNLVIMKHSSLFLDSYTEYC
TSVSNFLVMGGSQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNALFFLPIRRLHN
YAKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGKKRKEAEYTLSFWKTFPGKMTDS
LRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSE
ETGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDFPLYGGSSTVQRQ
EPPISRSAKYTFYKDTRLKDATYDGRWLSGKPHGRGVLKWPDGKVYSGTFRNGLEDGYGE
YRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSS
SPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDACQGNGVVVTQFGLYYEGNFHLNK
MMGNGVLLSEDDTIYEGEFSDDWTLCGKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKP
SLYESDKDRPKAFRKLGNLAVAADEKWRAVFDECWRQLGCESPGQGEVWKAWDNIAVALT
TNRRQHKDSPEILSRSQTQTLESLEYIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRL
VETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTVPLSAPL
PTGRRSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDIYWE
CVLRLNKQPDIALLGFLGVQRKFWPATLSILGESKKVLPSTKDACFASAVECLQQISTTF
TPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIED
LMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq 4956 nt   +upstreamnt  +downstreamnt
atggactcaaagaagaaaagctcagcagaggcagaaggatccaaagaaagaggcctagtc
catgtctggcaggcaggatccttttctctaacaccagagaggttgccaggctggggagga
aaaacagttcttcaggcggcccttggcgtgaagcatggagttcttctgactgaagatggt
gaggtctacagctttgggacccttccctggaaaagtgaagcagcagaaatttgtccaagc
agcccccttctagaaagtgccctggttgggcatcatgttgttactgtggcaacagggagc
ttccacagtggagcggtgacagaaagtggagtggtgtacatgtggggggagaacgctgcc
gggcagtgtgcagtagcgaaccagcagtatgtgtcggaaccaagtcctgtcagcatttct
gactcggagaccagccccttgctagcagttaggattctgcagttggcatgtggcgaggaa
cacacactggcattgtcaatcagcagagagatctgggcatggggcaccggctgtcagctg
ggtctcatcaccaccaccttcccagtgacaaagccacaaaaggtggaacaccttgctgga
cgagtggtgctccaggtggcctgtggtgcgttccacagccttgcacttgtgcagtgcctc
cctccccaggatctgaagccagtcccagagagatgcaatcagtgcagccagctgctcatc
accatgacagacaaagaggaccacgtgataatatcagacagccattgctgccctttaggt
gtgacactgtctgaatctcaagcagaaaagcacgccagcactgtgaccagccctcacccg
gagacgctggatgggcaaggagaggtgtttgagaacacagtagcagaagctgaactgaat
atgggaagcgatcagaccacaagtggcagtgccatttccgcccagcagaacatcgtggga
atggctgaagtgtcttctgccagaacagctccctcatacccagacacccagacggtaact
gcatacctgcagaagctatcagagcattcagtgaaggagaaccatgagcgtgaggaaaag
ctaccccaggtccagcctcttgtagaagaagcagttcctgatcttcacagtccaccaacc
acaagcacctcagccctcaacagcttggtggtctcctgtgcatctgctgttggtgtgaga
gtggccgccacctatgaagctggggccttgtctctcaagaaagttatgaacttttatagc
actgccccctgcgagccaggagctccgtcaggcactgcctccacaggcccagaaagtctg
aaagatctcagagaagagcaggtgaaacaggaatcactacaagggaagaaaagctcaagc
ctcatggatatcagagaggaggagtcggagggagggagtcgaagactctccctcccagga
ttgttgtcgcaagtttcccccaggctcttaaggaaggccgccagggtgaaaacacggaca
gtggttctgactcccacgtacagtggagaagcagatgccctcctgccttcgctgagaaca
gaggtgtggacctgggggaaaggcaaggaagggcagctggggcacggcgatgtcctgccc
aggcttcagccgttgtgtgtcaagtgtctggatggtaaagaggtcatccacttggaggca
ggtggctcccactctctcgcactgactgcgaaatctcaggtttactcatggggcagtaat
accttcggtcagctggggcattctgagtttccaacaacggttcctcgactctcgaaggtt
agcagtgaaagtggagtctggagtgtagctgcaggccacggttattccctgtttttagtg
gacactgaagacttccagcctgggttgtattacagtggccgccaggaccgtgcagaaggt
gacaccctgccagagaatcccagtggtacaacgactccggtacttctctcctgtagtaag
cttggatatatcagcagagtgacagcaggaaaagatagctacctagccttggtggataag
aacatcatgggatacatcgccagcctccatgagttggctaccacagaaagacggttttac
tcgaaactaagtgaaatcaagtcacagatacttaggcctcttctcagtctggaacatttg
ggcactgtgaccactgtccagctgttgcaggaagtcgccagccggttcagcaagttgtgt
tacctcattgggcagcatggagcctcactgagcagctacctgcaaggcatgaaggaagcc
aggaacctggtcatcatgaagcactcgagtcttttcttggacagttacacagagtattgt
acatcagtttcaaattttctggttatgggaggatcccagcttcttgctaagcctgcaatt
gatttcctaaataaaaaccaagaactcttgcaagatttgtcagaagtgaatgatgagaac
actcagttgatggaaatactgaatgcgctgtttttcttgccaatcagacgacttcataat
tatgcaaaagttttgctaaagctcgccacttgctttgaagtgacatcaccagagtatcaa
aagctgcaggattccagttcttgttatgagtctcttgctctccatcttggcaagaagagg
aaggaagcagagtacacgctgagcttctggaagaccttccctggaaaaatgacggattcc
ttgaggaagccagagcgccggctgctgtgtgagagcagtaaccgagccctctccctgcag
catgctggcaggttttctgtgaattggttcattctcttcaatgatgccctggtccatgct
cagttctccacacaccacgtgttccctttggccacactctgggcagagccactttctgaa
gaaactggtggcgtgaatggcttaaagataaccacacctgaagaacagttcacgctcatt
tcttcaacaccccaggaaaagaccaagtggcttcgggctatcagccaagccgtggaccag
gctttgagggggacgtctgacttcccactttacggaggcagcagcactgttcagaggcag
gaaccacccatctcaagaagtgccaaatacactttctacaaggatactcgcctaaaggac
gccacttacgatgggcgctggctttcagggaagccgcacggaaggggtgttttgaagtgg
cctgatgggaaggtgtattctggcacgttcaggaatggcttggaagacggatatggtgaa
tacagaatcccaaacaaggccctgaacaaagaagaccattacgtgggccattggaaggag
gggaaaatgtgtgggcaaggagtgtacagctatgcctctggtgaagtgtttgaaggctgc
tttcaagataacatgcgccacgggcacggtctcctccgcagtggaaaactgacttcttcc
tctcccagcatgttcattggccagtgggtaatggacaagaaagcagggtatggcgtcttc
gatgatatcaccaggggagaaaagtacatgggaatgtggcaggacgatgcatgccaaggg
aatggggtggtggtcacccagtttgggttatactacgaaggcaacttccaccttaataaa
atgatgggaaatggggttttgctttcggaagatgatactatatatgaaggagaattttct
gatgactggacactttgtggaaagggaacactgactatgccaaatggagattatattgaa
ggttattttagtggagaatggggatctgggataaaaatcactgggacctacttcaaacct
agcctatatgagagtgataaggacaggcccaaagccttcaggaagctgggaaacctggcc
gtggccgccgatgagaaatggagagcagtgtttgacgaatgctggcgccagctgggctgt
gagagcccaggccaaggggaggtttggaaagcgtgggataatattgctgtggccttgacc
accaaccgtcgccagcataaagacagtccagaaatactaagccgttcacagactcagacc
ctggagagtttggagtacattccccagcacgttggcgccttctctgtggagaaatatgat
gatatcaagaagtatttaataaaggcctgtgacactcctctgcacccactgggcaggctt
gtggagaccctggttgcagtgtatagaatgacttatgtgggcgtaggggccaaccgtcgg
ttactgcaggaagctgtgaaggagattaagtcttatctcaagaggattttccaacttgtg
aggttcttgtttcctgagcttcctgaagagggcagcacagttcctctctctgctcctctg
cccactggaagaagatccttctgcactgggaaatcagattccagatccgagtcaccagag
ccaggttatgtagtaacaagttctggcttactgcttccggtgctgctgcctcggctctac
ccgcctctcttcatgctctatgccctggacaatgaccgagaggaagacatttactgggaa
tgtgtgcttcgactaaacaagcagccagatattgctctcctgggctttcttggagtacag
aggaaattctggccagcaaccttgtcaatccttggagagagtaaaaaggtactgccatcc
acaaaggatgcttgttttgcatctgcagtagaatgtctgcagcagatcagcacaacattt
actccatcagacaaacttaaagtgatccagcagaccttcgaagaaatctctcagagtgtg
ctggcgtcgctgcaggaggacttcctttggtccatggatgacttgttccctgtcttctta
tacgtggtgctgcgggccaggattcggaatttaggctctgaagttcatctcattgaggat
ctgatggacccctatctccagcatggggagcaaggcataatgttcaccaccttgaaggcc
tgttactaccagattcagcgtgagaagcttaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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