KEGG   Rattus norvegicus (rat): 363247
Entry
363247            CDS       T01003                                 
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    363247 (Xrcc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    363247 (Xrcc5)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     363247 (Xrcc5)
SSDB
Motif
Pfam: Ku_N Ku Ku_PK_bind Ku_C DUF6005
Other DBs
NCBI-GeneID: 363247
NCBI-ProteinID: NP_803154
RGD: 3976
Ensembl: ENSRNOG00000016105
UniProt: Q6P7P8
Position
9:81404507..81493293
AA seq 732 aa
MAWSGNKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYG
TESTDNALAGKDQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSSISLQFFLPFPIDKNGEPGETED
HDSSFDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEGKDGLDEIYSFSESLQQLCIFKKI
ERRSLPWPCQLTIGPNLSIRIVAYKSIVQEKFKKSWVVVDARTLKKEDIQKETVYCLNDD
DETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHRRFFMGHQ
VLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRANPQVGVAFPFIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIIEDLFPTS
KIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCEIPLSKVKTLFPLT
EVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGHISISSLAEGNVTKVGSVNPVENFR
VLVRQKIASFEEASLQLMSHIEQFLDTNETLYFMKSMDCIKALREEAIQFSEEQRFNSFL
EGLREKVEIKQLNHFWEIVVQDGITLITKDESPGSSVTAEEATKFLTPKDKAKEDTTGLE
EGGDVDDLLDMI
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggcgtggtccggtaataaggcagctgttgtgctgtgtatggatgtgggggttgccatg
ggtaactcctttcctggtgaagaatccccacttgaacaggccaagaaagtgatgactatg
tttgtccaacgacaggtgttttcggagagcaaggatgagatcgccttagtcctctatggt
acagagagcactgataacgcccttgctggcaaggaccagtatcagaacatcacagtgcac
aggcacctgatgctaccagattttgatttgctggaagacatcggaaacaaaatccaacca
agttctcaacaagccgacttcctggacgccctgattgtgtgcatggatttgattcagcgt
gaaaccataggaaagaagtttgggaagaagcatattgaagtgttcactgacctcagcagc
ccattcagccaagaccaactggacattataatttgtaacctgaagaagtccagcatctcc
ctgcagttctttctgccttttccaatcgacaagaatggtgagcctggggagacagaagac
cacgactccagcttcgaccactgtgcaccctccttccctcaaaaaggacttactgagcag
caaaaggaaggcatccacatggtgacgagggtgatgctgtctttagaaggcaaagatggt
ctggatgaaatttattccttcagcgagagtcttcagcaactgtgcatctttaagaagatt
gagaggcggtccttgccctggccctgccaactgaccatcggccccaacttgtctataagg
atcgtagcctataaatcgattgtacaggagaaatttaaaaagagttgggtagttgtggac
gcaagaactctaaagaaggaagatatacaaaaagagactgtttattgcctaaatgacgat
gatgaaactgaagtttccaaagaggacactattcaagggttccgctatggaagcgacatc
attcctttttctaaagtggatgaggaacaaatgaaatataaatcggaggggaagtgcttc
tctgttctggggttctgtaaatcttctcaggttcatagaagattcttcatgggacatcaa
gttctgaaggtcttcgcagcgaaggatgatgaggcagcagctgttgcactttcttcccta
gttcacgctttggatgagttaaacatggtcgctatcgtccgctacgcctatgacaaaaga
gctaatcctcaagttggtgtagccttccctttcattaaggatgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcctcactgaaaaac
aataagaagtgcacccccacagaggcacagctgagtgcgatcgatgatctgattgattcc
atgagcttggtaaagaaaaacgaggaagaagacatcatcgaagacttgtttccaacctcc
aaaattccaaatcctgaatttcagcggttgtaccagtgtctgctgcacagagccttacat
ctccaggagcggctgcccccaattcagcagcacattttgaatatgctggatccccccact
gagatgaaagcaaaatgtgagattccactctctaaagtaaagacccttttccctctgacg
gaagtcgttaagaaaaaggaccaagtgactgctcaggacgttttccaagacaatattgaa
gaggggcccgctgctaaaaaatacaagactgagaaagaagaaggtcacatcagcatctcc
agcctggcagaagggaatgtcaccaaggttggaagtgtgaatcctgttgaaaacttccgt
gtcctagtaagacagaagattgccagctttgaggaagcgagtctccagctaatgagtcac
attgaacagtttttggataccaatgaaacactgtattttatgaaaagtatggactgcatc
aaagctctccgggaggaagccattcagttttcagaagagcagcgtttcaacagtttcctg
gaaggccttcgagagaaagtggaaattaaacaattaaatcatttctgggaaattgtcgtg
caggatggaattactctgatcaccaaagacgaaagcccaggaagctctgtcacagctgag
gaggccacgaagttcctgacccccaaagacaaagcaaaagaagacacaacaggacttgaa
gaaggtggtgatgtggatgatttactggacatgatatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system