KEGG   Rattus norvegicus (rat): 363259
Entry
363259            CDS       T01003                                 
Symbol
Obsl1
Name
(RefSeq) obscurin-like protein 1 isoform 1
  KO
K19574  obscurin-like protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    363259 (Obsl1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   3M complex
    363259 (Obsl1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 V-set C2-set_2 Ig_5 Ig_4 Izumo-Ig BiPBP_C Tissue_fac fn3
Other DBs
NCBI-GeneID: 363259
NCBI-ProteinID: NP_001363949
RGD: 1306073
Ensembl: ENSRNOG00000015346
Position
9:complement(84416447..84442415)
AA seq 1025 aa
MKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPTVLWEKGGQQLVASERLSF
PEDGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEPEPQSSECPPPP
PGTGEGAPVFLTGPQSQWVLRGAEVVLTCQVGGLPEPKLYWEKDGMALDEVWDSSHYTLE
PDRGASDGGASLTLRILAARLPDSGVYVCHARNAHGHAQAGALLQVHQPHENPPQDPDEP
PVRVIEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHLEGRPLLPDRRRLMYRDRDG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIVVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLVIHRLKADDDGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVLEGENAVLLVETQEAGVQGCWSRDGEELPATCQSSCGHMH
ALVLPGVTREDAGEVTFSLGNSRTTTLLRVKCVKHSPPGPPVLVEMFKGQKNTVLLTWKP
PEPPPETSFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPTEGDYRFRICTVSEHGR
SPHVVFNGSAHLVPTARLVSGLEDVQVYDGEDAVFSLDLSTIIQGSWFLNGELLKNDEAE
GQVEPGALRYRIEQKGLQHRLILQTVKHQDNGALVGFICPGVQDSAALSIQESPVHILSP
QDKVLLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESESLVVKMDGRKHRLILPEAQV
RDSGEFECRTEGISAFFSVTVQDPPVHIVDPQEHVFVHAITSESVMLTCEVDREDAAVHW
YKDGQEVEESAVIVLEKEGPRHRLVLPAAQPSDGGEFQCVVGDERAYFTVTITDVSSWIV
YPNGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVLESPALLLEKEDTIRRLVLPSV
QLEDSGEYLCEIHDESASFTITVTESYQSQDSPNNNPELCVLLKKPKTQRFWSRLPPWRR
TAGTE
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgaaggccagttcaggggatcaggggagtcccccgtgtttcctacgcttcccgcggccc
gtgcgggtggtaagtggcgcggaggccgagctcaaatgcgtggtcctgggagagccgccg
cccaccgtcttgtgggagaaaggcgggcagcagctggtggcctcggagcgcctgagcttt
ccagaggacggcgccgagcacggcctgctgttgagcggcgcgctgcccaccgacgccggg
gtctacgtgtgccgcgcccgcaacgcggccggagaggcctacgcggcggccgccgtcacc
gtgctggaacccccggccccagagcccgagccccagtcttccgagtgtccgccgccgcct
ccgggcaccggggagggcgccccggtgtttctgacgggaccccagtcccagtgggtgctg
cgaggggcggaggtggtgctgacgtgccaggtgggaggcctcccggagcccaagctgtac
tgggagaaggatgggatggccttggacgaagtgtgggacagcagccactacacgctggag
ccggaccgcggcgcgagtgacgggggcgcaagcctgacgttacgcatcctggcagcgcgg
ctgcccgattccggggtgtacgtgtgccacgcccgcaacgcgcacggccacgcgcaggcg
ggcgcgctgctccaggtgcaccagccccacgagaacccgccccaggatcccgatgagccc
cccgtacgcgtgatagagccgctcaaatgcgcgcccaagaccttctgggtgaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcctgagcccgagatcgaatggcac
ttggagggccgccctctgctccccgaccgccgccgcctcatgtaccgcgaccgtgacggt
ggctttgtacttaaggtgctctactgccaggccaaggaccgtggcctctacgtgtgcgcg
gcgcgcaactccgcgggccagaccctaagcgcggttcagctgcacgtgaaagaaccgcgc
ctccggttcacaaggcctctgcaggatgtggagggtcgagagcatgggatcgtagtccta
gagtgtaaagtacccaactctcggattcccaccgcctggttccgagaggaccagcgactg
ttaccctgccgcaagtacgagcagattgaagaaggcactgtgagacgcctcgtcatccac
aggctgaaggcagatgacgatggtgtctatctgtgcgagatgcggggtcgagtgcgcacg
gtagccaacgtgactgtcaaaggacccatcctgaagcgcttaccccggaagctggatgtc
ctggagggagagaacgcggtgctgctggtggagactcaagaagctggggtccaggggtgc
tggagccgtgatggggaggagctgccagccacctgccagagtagttgtggtcacatgcat
gccctggtccttcctggggtgacccgagaagatgctggcgaggtcacctttagcctgggc
aactcccgtaccaccaccctgctcagagtcaaatgtgtcaagcacagtcctcctgggccc
cctgtactggttgagatgttcaaaggccaaaagaacacagtcctgctgacctggaagccc
ccagagccacctccagaaacctccttcatctaccgcctggagcggcaggaagtcgggtct
gaggattggatccagtgcttcagcattgagaaagctggagccgtagaggtgccaggggac
tgtgtacccaccgagggtgactaccgcttccgcatctgcacagtcagtgaacatggccgc
agtccccatgtcgtgttcaatggctctgctcaccttgtgcccacagctcgcctggtgtca
ggcctggaagatgtgcaggtgtatgacggggaagatgccgtcttctcccttgatctgtcc
accatcatccagggctcttggttccttaatggagagctgctcaagaatgatgaggcagag
ggccaggtggagcctggagccctccggtaccgaatagagcagaagggcctgcagcacaga
ctcatcctgcaaacggtcaagcaccaggacaatggggccctggtaggcttcatctgccct
ggtgtgcaagattctgctgccctcagtatccaagaaagcccagtgcacatcctgagtccc
caggataaggtgttgctgaccttcacgacctctgaacgggtagtgttgacctgtgagctc
tcaagagtggattttccagcaacctggtacaaggatgggcagaaggtggaggagagcgag
tcgctcgtagtgaagatggatgggcgcaaacaccgactgatcctgcctgaggctcaagtc
cgagacagtggtgaatttgaatgcagaacggaagggatctcagccttcttcagtgtcact
gttcaagatcccccagtgcacatcgtggacccccaagaacatgtgtttgtccatgccatc
acttccgagagtgtcatgctgacctgtgaggtggaccgagaggacgcagctgtgcactgg
tacaaggatgggcaggaggtggaggagagtgccgtcatcgtattagaaaaggaagggccc
cgtcaccgcctggtgcttcctgcagctcagccctctgacgggggcgagtttcagtgtgtg
gtgggagacgaacgggcctacttcacagttaccatcacagatgtctcttcatggatcgtg
taccccaatggcaaagtgtatgtggcagctgtacgcctagaacgtgtggtgctgacctgt
gagctgtgccggccctgggctgaggtgcgctggaccaaagatggggaggaggtattggag
agcccagcactgctcctggagaaggaggataccatccggcgcctggtgctgccctctgtc
cagcttgaggactctggcgagtacctgtgtgaaatccatgatgagtcagcttccttcacc
atcaccgtcacagagtcataccaaagtcaggacagtccaaataacaacccggagttatgc
gtcctcttgaaaaagccgaagacccagcggttctggtctcgtctcccaccgtggcgacga
acagctggcactgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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