KEGG   Rattus norvegicus (rat): 363519
Entry
363519            CDS       T01003                                 
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1
  KO
K14966  host cell factor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
rno04980  Cobalamin transport and metabolism
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    363519 (Hcfc1)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    363519 (Hcfc1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    363519 (Hcfc1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    363519 (Hcfc1)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    363519 (Hcfc1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    363519 (Hcfc1)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     363519 (Hcfc1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     363519 (Hcfc1)
   HMT complexes
    COMPASS/SET1 complex
     363519 (Hcfc1)
    MLL-HCF complex
     363519 (Hcfc1)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     363519 (Hcfc1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    363519 (Hcfc1)
SSDB
Motif
Pfam: Kelch_5 Kelch_3 Kelch_1 Kelch_4 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 363519
NCBI-ProteinID: NP_001401663
RGD: 1563804
Ensembl: ENSRNOG00000051948
Position
X:complement(156839100..156864132)
AA seq 2046 aa
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLVPQAAAAPPSTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPASVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSAVGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSMGTGQQRDARRATN
TPTVVRITVAPGALERAQGTVKPPCQTQQTNMTSTTMTVQATGAPCSAGPLLRPSVALET
GSHSPAFVQLALPSVRVGLSGPSSKDVPTGRQPETYHTYTTNTPTTARSIMVAGELGTAR
VVPTSQYDCLQASSPSSTMTMTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGAGQPEGGQQPASGHPCETHQTTSTGTTMSV
SVGALIPDATPSHGTLESGLEVVAVPTVTSQAGATLLASFSTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVASTQGDSTNITSASAITTTVSSTLPRAVTTVTQST
PVPGPSVPPPEELQVSPGPRQQLPPRQLLQSASTPLMGESAEVLSASQTPELQAAVDLSS
TGDPSSVQEPTTSAVVATVVVQPPQPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEE
LAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAELGHLS
AEGQEGQATTIPIVLTQQELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPSIE
SNCLNELASAVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIE
SLGVKPDLPPPPSKAPIKKENQWFDVGVIKGTSVMVTHYFLPPDDAVQSDDDSGTVPDYN
QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLT
WEPPSVTSGKIIEYSVYLAIQSSQASGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNA
HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKK
SKADGQ
NT seq 6141 nt   +upstreamnt  +downstreamnt
atggcttcggctgtgtcccccgctaacttgccagcggtgcttctacagccccgctggaaa
cgggtggtgggttggtcgggtcccgtgccgcgaccccgccacggccaccgtgcagtagct
atcaaggagcttatagtggtgtttggcggcggcaatgaggggatagtggacgaactacac
gtgtacaacactgcgaccaaccagtggttcatcccagctgtgagaggggatatccctcca
gggtgtgcagcctatggctttgtatgtgatggtactcgcctgctggtgtttggtggaatg
gtagagtatggaaaatacagcaacgacctctatgagctccaggcaagtcgctgggaatgg
aagagactgaaggcaaagacacccaaaaacgggcctcctccgtgtcctcggcttggacac
agtttctcccttgtgggcaacaaatgttacctgtttgggggtctggccaatgatagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatatattctcgaactacggcca
ggctctggagtggtagcttgggacattcccatcacttatggtgtccttcctccaccccgg
gagtcacatactgctgtggtctacactgaaaaagataacaagaaatccaagctggtgatc
tatggagggatgagtggctgcaggctaggggacctttggaccctggacattgagacactg
acatggaataagcccagccttagtggggtggcaccccttcctcgcagcctccactctgca
accaccataggaaacaaaatgtatgtatttggtggctgggtgccccttgtcatggacgat
gtcaaagtggccacacacgagaaggaatggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggaaaccatcctgatggatacactggaggacaacattcctcga
gctcgagcaggccactgtgctgttgccatcaatactcgcctgtatatttggagtggccgt
gatggctatcgcaaggcctggaacaatcaggtctgctgcaaggacctgtggtatctggag
acagaaaagccaccacccccagcccgagttcaactagtacgagccaacaccaactcactg
gaggttagctggggtgcagtggcaacagccgacagttaccttctacaactccagaaatat
gacattcctgccacagctgctacggctacctcccccactcccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgcgccagcagcagctgcacctgctgtacaaccactg
acccaagtaggcatcacacttgtgccccaggctgccgctgcacccccaagcacaaccacc
atccaggtcttgccgacagtgccaggcagctctatttctgtgcccactgcagccaggact
caaggtgtccctgctgttctcaaagtgactggtcctcaagctacaacaggaacaccactg
gtcaccatgagacctgcaagccaggctggaaaagctcctgtcactgtgacttccctgcct
gccagtgtgagaatggttgtacccactcagagtgcccagggcacggtgattggcagcaac
ccacagatgagtgggatggctgcattggctgctgctgctgctgccacacagaaaatccct
ccttcctcagcacccacagtgctaagtgtcccagcaggcaccaccattgtcaagacagtg
gctgtgacacctggtacaaccactcttccagccactgtgaaggtggcctcctcacctgtt
atggtgagcaacccagctactcgaatgctaaagactgcagctgcccaagtggggacatct
gtgtcctctgctgccaacacatctacccgccctatcatcacagtacataaatcagggact
gtaacagtggcccagcaagcccaggtggtgaccacggtggtaggcggagtcaccaagacc
atcactctagtgaagagccccatctctgtcccgggaggcagtgctctgatttccaatctt
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtgacaggccaa
gcatctacaggtcctgtgactcagatcatccagaccaaaggacccctgccagcagggact
atcctgaagttggtgacatcagcagatggcaagcccacaaccatcatcaccaccacacag
gctagtggggcagggaccaagcccactatcctgggcatcagtagtgtctctcctagcacc
accaaacccggcacaactaccatcattaagaccattcccatgtcagcaattatcacccag
gcaggcgccacaggtgttaccagcagtcctggcattaagtcccccatcacaattatcacc
accaaggtgatgacttcaggaacaggagcacctgccaaaatcatcactgctgtccccaag
attgctactggccatgggcaacaaggagtgacccaggtggtgctaaagggggcccctgga
cagccaggcaccatcctccgcactgtgcccatgggcggcgttcgcctggtcacccctgtc
accgtctccgctgtcaagccagctgtcaccacattggttgtgaagggcaccacaggtgtt
acaacactaggcacagtgacaggcactgtctccaccagccttgccggagctggggcacat
agcaccagtgcttctctggctacacctatcactactttgggcaccattgctactctctca
agtcaggtgatcaaccctactgctatcacagtgtcagctgcacagactacactaacagct
gctggtggactcaccacacctacaatcacaatgcagcctgtctcccagcctacccaggtg
actctgatcacagcacctagcggggttgaggcccaacctgtacatgaccttcctgtgtcc
attttggcctcacctactacagagcaacccacagcaacagtcactatcgctgactcaggc
cagggtgatgtacaacctggcactgtgacactggtgtgttccaacccaccctgtgaaacc
catgaaacaggcaccaccaacacagctaccaccactgttgtggctaaccttgggggacat
cctcagcctacccaggtgcagtttgtttgtgacagacaggaggcagctgcttcacttgtg
acctcagctgtgggacaacagaatggtaatgtggtccgtgtctgttcaaaccccccctgt
gaaacccatgagacaggcaccaccaacactgccacaacagccacctcaaacatggctggg
cagcatggctgctcgaatcctccctgcgagactcatgagacaggtaccaccagcactgcc
actacagcaatgtccagcatgggcactgggcagcagcgagacgctcgtcgtgccactaac
acccccactgtagtgcggatcactgtggctcctggggcattggaaagagcccagggtact
gtgaagcctccgtgccaaacccagcagaccaacatgaccagcaccaccatgactgtgcag
gccactggagctccatgctcagctggcccactgctcaggccaagtgtggcactggagact
gggagccatagccctgccttcgtgcaactagcccttccaagtgtcagagttgggctaagt
ggccccagcagcaaggacgtgcccacagggcgccaaccagagacatatcatacttacaca
accaataccccaaccacagcccgttctatcatggttgctggggagcttggtacagctcgg
gtggtccccacatctcaatatgattgcctccaggcaagctctcccagtagcaccatgact
atgacagccctagaggccctgctgtgcccttcagctactgtgacccaagtctgctccaac
ccaccatgtgagacccatgagacgggtaccaccaacaccgccactacctccaatgcgggc
agtgctcagcgagtatgctctaacccaccttgtgagactcatgagacgggcaccacacac
acagctaccactgccacatcaaatggaggcgcaggccagcctgagggtggacaacagcct
gccagtggccatccctgcgagacacaccagaccacttccactggcaccactatgtcagtc
agtgtgggtgccctgattcctgatgccactccctctcatgggaccctggagtctggttta
gaggtggtagcagtgcccactgtcacctcccaggctggtgccacattgctggcctctttc
tcaacacagagggtatgctccaatcctccttgcgagacccacgagacaggtacaacgcac
acagccaccactgtcacctctaacatgagctcaaaccaagaccctccaccagctgccagt
gaccaaggagaagtggcgagtacccaaggtgacagcacaaatatcaccagtgccagtgct
atcactacaactgtgtcttctacactgccaagagcagtgaccactgtgacacagtctaca
ccagtcccaggtccttctgtgccgcccccagaggaactccaggtctcaccagggcctcgc
cagcagctgcctccaaggcaactcctgcagtctgcctccacacccctgatgggggagtcc
gccgaggtcctgtcagcctcccagacccctgagctccaggccgccgtggatctgagcagc
actggggacccatcttcagtccaggagcctaccacctctgctgttgtggccactgtggtg
gtccaaccaccccaacccacacagtctgaagtagaccagttatcacttccccaagagctg
atggctgaagcccaggcgggcaccacaacccttatggtaacagggctcactccagaggag
ctggcagtgactgctgctgctgaagcagctgctcaagctgcagccactgaagaagctcaa
gccttggccatccaggctgtgctccaggctgcacagcaggctgtcatgggcactggggag
cccatggatacatctgaagcagcagcagcagtgacacaagcagaactgggtcatctttca
gctgaaggccaagagggtcaggctaccaccatacccattgtgctgacacagcaggagctt
gcagctcttgtacagcagcagcagcagctccaggaggctcaagcccaagcccagcaacag
caccaccttcccactgaggctctggccccagctgacagtctcaatgacccatccatcgag
agcaactgcctcaatgagttagctagtgctgtccccagcactgtggccttgctaccctca
acagctactgagagtttggctccatctaacacatttgtggctcctcagcctgttgttgta
gccagtccagcaaagatgcaggctgcagcaacccttactgaagtggcaaatggcattgag
tccctgggtgtgaaaccggacttgccacccccacccagcaaagcccctataaaaaaggag
aaccagtggtttgatgtgggggtcattaaaggtaccagtgtaatggtgacacactatttt
ctgccaccagatgatgctgttcagtcagatgatgactcaggcaccgttccagactataac
cagctaaagaagcaggagctgcagccaggcacagcttataaatttcgagttgctggaatc
aatgcttgtggccggggccccttcagtgagatctcagcctttaagacttgtctgcctggt
tttccaggggctccttgtgctattaaaatcagcaagagcccagatggtgctcacctcacc
tgggagccaccctctgtgacctccggcaagattatcgagtactctgtgtacctggccatc
cagagctcacaggccagtggtgagcccaagagctctaccccagcccagctggccttcatg
cgagtatactgtgggcctagcccttcctgccttgtgcagtcctccagcctctccaacgcc
cacattgactatactacaaagcctgccatcatcttccgcattgctgcccgcaatgaaaag
ggctacggccctgccacacaagtgaggtggttacaagaaaccagtaaagacagctctggc
accaagccagctagcaagcggcccatgtcgtctccagaaatgaaatctgctccaaagaag
tctaaggctgatggtcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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