KEGG   Rattus norvegicus (rat): 363603
Entry
363603            CDS       T01003                                 
Symbol
Cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    363603 (Cnot8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    363603 (Cnot8)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     363603 (Cnot8)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     363603 (Cnot8)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 363603
NCBI-ProteinID: NP_001008383
RGD: 1306401
Ensembl: ENSRNOG00000002630
UniProt: F7F1V4 A6HEQ7
Position
10:42782042..42795207
AA seq 292 aa
MPAALVENSQVICEVWASNLEEEMRKIRETVLSYSYIAMDTEFPGVVVRPIGEFRSSIDY
QYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSG
LQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHE
FFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR
MKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDSAQEKMSILAMINNMQQ
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcctgcggcacttgtagaaaacagtcaggtcatctgtgaggtgtgggccagcaatctt
gaggaggagatgcggaagatccgggagactgtcctcagctacagctacatcgccatggac
acagagtttccaggtgttgttgtacgaccgattggtgaatttcgaagctccatagattac
cagtatcagcttttgcggtgcaatgttgaccttctaaaaatcatccagctgggccttaca
ttcacaaatgagaagggggagtacccttctggaatcaacacgtggcagttcaacttcaag
ttcaacctgacagaggacatgtactcccaggattccatagacctgctagccaactcaggg
ctgcagttccagaagcacgaggaggaagggatcgatacgttgcactttgcagagctgctt
atgacgtcgggagtggtcctctgtgacaacgtcaagtggctttcatttcacagtggttat
gattttggctacatggtgaagctgctcacggattctcgcctgccagaagaagagcacgag
ttttttcacatcctgaatcttttcttcccatccatttatgatgtgaaatacctgatgaag
agctgcaaaaatcttaagggaggccttcaggaggtggctgatcagttggatttgcagagg
attggaaggcagcatcaagcaggctcagactctctgctgacagggatggctttcttcagg
atgaaagagctattctttgaggacagtattgatgatgccaagtattgtgggcgcctctat
ggcctgggcacaggagtggcccagaagcagaatgaggatgtggactctgcccaggagaag
atgagcatcttggccatgatcaacaacatgcagcagtga

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