KEGG   Rattus norvegicus (rat): 363948
Entry
363948            CDS       T01003                                 
Symbol
Cdh20
Name
(RefSeq) cadherin-20 precursor
  KO
K06807  cadherin 20, type 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    363948 (Cdh20)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Major cadherins
   363948 (Cdh20)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_3 Cadherin_2 Cadherin_4
Other DBs
NCBI-GeneID: 363948
NCBI-ProteinID: NP_001012766
RGD: 1305438
Ensembl: ENSRNOG00000014556
UniProt: Q5DWV1
Position
13:21252272..21583526
AA seq 801 aa
MWTTGRMSNAKSWLGLGTSLYFWALMDLATTVLSSTPMPEVELDTLFSGKPQSHQRSRRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGIIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGSNPHV
EMRFLNLGPFQDTTTVHIIVEDVDEPPVFEPRFYFVEVPEDVTIGTTIQIISAKDPDMTN
NSIRYSIDRGSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVAA
TIKVLDVNDNAPEFPRFYEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFYLPILIADSGQPVLSSTGTLTIQVCSCSDD
GHVMSCSPEAYMLPVSLSRGALIAILACVFVLLVLVLLILSMRRHRKQPYIIDDDENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVSS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGASEGPSPLW
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtggactacaggtagaatgagcaatgcaaagagctggcttggacttggcacatccttg
tacttctgggcactgatggaccttgcgaccaccgttctgtccagcactccgatgccggaa
gtcgagttagatacactcttctcaggaaagccacagtcacatcagcggagcaggaggagc
tgggtttggaaccaattttttgtcctggaagagtacactgggactgaccctctgtatgtc
ggcaagcttcattcagacatggacaggggagatggatccatcaaatacatcctttcagga
gaaggagcagggatcgtgtttaccattgatgacaccactggagacatccatgccattcag
aggcttgatcgagaggaaagagcccaatatactctaagagctcaagccctagacaggaga
acaggccggccaatggagccagaatcagagtttattatcaaaattcaagatatcaatgac
aacgagcccaagttcctggatggaccttacgttgccactgtgccagaaatgtcaccagta
ggtacctctgttatccaagtgacagccacagatgctgatgacccaacctatggcaacagt
gcccgagttgtgtacagcattctccagggccagccatatttttctgtggactccaaaaca
ggtataatcagaacagcgctcatgaacatggacagagaagccaaggaatactatgaagtg
attatccaagccaaggatatggggggtcaacttggaggattggctgggaccacaacagtc
aacatcacactctcagatgtcaatgataacccaccccggtttccacagaaacattatcag
atgagtgtgctggagtccgctcctgttagctcgactgtggggagagtgtttgccaaagac
ctggacgaaggcatcaatgcagaaatgaagtacaccattgtggatggagatggtgcagac
gcttttgatatcaatacagacccgaacttccaagttggcatcataactgtgaagaagcct
ttgagttttgaaagcaagaaaagctacaccctgaaggtggaaggatccaatcctcacgta
gagatgcgttttctgaaccttggcccatttcaggacacaacaacagtgcacatcattgtg
gaggatgtggacgagccccctgtgtttgagccccgcttttattttgtggaggtgccagag
gatgtgacaattggaacaaccatacagatcatttctgccaaggacccagacatgaccaac
aactcaatcagatactccattgacagaggcagcgaccctggaagatttttctatgttgac
attacaacaggtgctctaatgactgcaagaccactagacagagaagagttttcttggcat
aatataactgttcttgctatggaaatgaacaacccctcccaagtgggaagtgttgctgcc
acaatcaaagtcctagatgtgaatgacaatgctccagagtttcccagattctatgaagct
ttcatctgtgaaaatgccaaagcgggacagctgatccagacagtgagtgctgtggatcaa
gatgaccctcacaatggtcaacatttctactacagtttggctcctgaggctgctaacaac
cccaacttcactgtcagggacaaccaagataataccgctcgcattctgaccaggaggtcc
ggcttccgacagcaggagcagagcgtcttctacctgcccatcctcatagcagacagcggc
cagccggtcctcagcagcaccggcacacttaccattcaagtgtgcagctgcagtgacgat
ggccacgtcatgtcctgcagcccagaggcatatatgctcccagtcagtttgagtcggggt
gccctcatcgccatcctggcctgcgtctttgttctcttagtattggtgctgctcatcctg
tccatgaggcgccaccgaaaacaaccctacatcatcgacgacgacgagaacatccacgag
aacattgtgcgctatgacgacgaggggggaggcgaagaggacacagaggccttcgacatc
gccgccatgtggaacccgcgcgaggcgcaggcgggcgccgccccgaagacgcggcaggac
atgctccccgagatcgagagcctctcccgctacgtgcctcagacgtgcgcggtcagcagc
acggtccacagctacgtgctggccaagctctacgaggccgacatggacctgtgggccccg
cccttcgattccctgcagacctacatgtttgagggggacggctccgtggccggctcgctc
agctcgcttcagtcagccacctcggactcagagcagagctttgatttcctcacggactgg
ggacctcgcttccggaaactggcagaactctacggggcgtcggaggggccctcgcccttg
tggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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