KEGG   Rattus norvegicus (rat): 363982
Entry
363982            CDS       T01003                                 
Symbol
Yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    363982 (Yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    363982 (Yod1)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C88
   363982 (Yod1)
SSDB
Motif
Pfam: OTU OTU1_UBXL Ubiquitin_2 zf-C2H2_2
Other DBs
NCBI-GeneID: 363982
NCBI-ProteinID: NP_001008889
RGD: 1359726
Ensembl: ENSRNOG00000025704
UniProt: Q32Q05
Position
13:44727319..44733933
AA seq 343 aa
MFGGAKGGHFGVPPAGCSGAVSQAAAGTKAGPAGGRPADTMWRLRCKAKGGTHVLQGLSN
RTRLRELQGQIAAITGIAPGSQRILVGYPPECLDLSDRDITLGDLPIQSGDMLIVEEDQT
RPKASPAFSKHGAPSYVRETLPVLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRL
IAQIVASDPDLYSEAILGKTNEEYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVR
IDRFGEDAGYTKRVLLIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALELADEAR
RKRQFTDVNRFTLRCMLCQKGLTGQAEARDHARETGHTNFGEV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgtttggaggcgcgaaaggcggccattttggggtcccccccgctggttgttccggcgct
gtctcccaggctgcggctgggaccaaggctggccccgcaggaggccggccggccgacact
atgtggcggctccgctgcaaggccaagggtggcacccacgttttgcagggtctttccaac
cggacccgcttacgggaactgcagggccaaatcgccgctatcaccggcatcgctcctggc
agtcagcgaatcctcgtcggctacccaccagagtgcctggatctcagcgaccgggacatc
actctcggggacctgcccatccagtcaggtgacatgctgattgttgaagaagaccaaacc
agaccaaaagcttcacctgcgttttcaaaacatggtgctcctagttatgtcagggaaact
ctgcctgtgcttaccagaaccgcagtcccagcagacaactcttgcctctttaccagtgtg
tactatgtagttgaaggaggagtcttgaatccagcttgtgcccctgagatgagacgcctc
atagcacaaattgtagccagtgatccagacttgtatagtgaggcaatactgggaaagaca
aacgaagagtactgtgattggatcagaagggatgatacttgggggggagcaattgagata
tcaatcctgtccaagttttatcaatgtgaaatatgtgtagtagatacacagacagtcaga
attgatcgttttggggaagatgcaggctataccaaaagggttctactcatctacgatggc
attcactacgatccgcttcagcgaaacttccctgatccggatacccctcctctgaccatt
ttctcctcaaatgatgatattgttctcgtacaagcactggaattagctgatgaagctaga
agaaagagacagttcactgatgtaaaccgcttcaccctgagatgcatgctgtgtcagaag
ggcctaaccggacaagctgaagcaagggaccatgccagggagacaggccataccaacttt
ggagaggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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