KEGG   Rattus norvegicus (rat): 364398
Entry
364398            CDS       T01003                                 
Symbol
Trim13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
  KO
K12003  tripartite motif-containing protein 13 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    364398 (Trim13)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     364398 (Trim13)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    364398 (Trim13)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4_2 DUF3974 ATP-synt_E_2 zf-Nse
Other DBs
NCBI-GeneID: 364398
NCBI-ProteinID: NP_001012210
RGD: 1307609
Ensembl: ENSRNOG00000009075
UniProt: Q5M7V1
Position
15:39909587..39948719
AA seq 407 aa
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE
TSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKEHLGQPLNIFCVTDMQLICGVCATR
GSHTKHVFSSIEDAYTQERDAFEFLFQSFETWRRGDALSRLDTLETNKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQTYDPEINKLNSILQEQRMAFNIAEAFK
DVSEPIIFLQQMQEFREKIKVIKETPLPPSNLPTSPLMKNFDTSQWEDIKLVDVDKLSLP
QDTGVLTSRSPWHPCLLLMAVVLLGLLVFFGPTVFLEWSPLEELATWKDCLSSFNSYLTK
SADFVEQSVFYWEQMTDGLFVFSERVKNVSLVALNNVAEFVCKYKLL
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggagttgcttgaagaagatctcacatgcccgatttgttgcagtttgtttgatgatccc
cgagtgttgccctgctcacacaacttctgcaaaaaatgcttagaagggctcttagagggg
aatgtgcggaattcattgtggagaccatctccattcaagtgtcctacctgtcgtaaggaa
acttcagctactggagtcaatagtctgcaggttaattactccctaaagggtattgtggag
aaatacaacaaaatcaagatttctcccaaaatgcccgtgtgcaaagaacacttggggcag
cctctcaacattttctgtgtgaccgacatgcagctgatctgtggggtctgtgctactcgt
ggcagtcacaccaagcatgtcttctcgtctattgaggatgcctacactcaggaaagggat
gccttcgagttcctctttcagagctttgagacttggcgccggggagatgctctttcccgc
ttggacactttggaaacaaacaagaggaaatccctacagttgctcactaaagattcagat
aaagtaaaggagttttttgagaagttacagcacacattggatcaaaagaagaatgaaatc
ctgtctgactttgaaactatgaagctggcagttatgcagacctacgacccggagatcaac
aagctcaacagtattttacaggagcagcgaatggccttcaacatcgccgaggcgttcaaa
gacgtctcagaacccattatatttctgcaacagatgcaggagttcagggagaaaatcaaa
gtaatcaaggaaactcctttgccaccctctaatttgcccacaagccctttaatgaagaac
ttcgataccagtcagtgggaggacattaaactagtggacgtggataaactctctctgcct
caagacaccggcgtgctcaccagcaggagcccctggcacccctgtctgctgctcatggcg
gtagttctgctgggtctccttgtattctttggccccactgtattcctggagtggtctcca
cttgaagaattggcaacttggaaagactgcctttcaagcttcaattcttacctgactaaa
tcagctgactttgtagagcaatctgttttttactgggaacagatgacagatgggcttttc
gtttttagtgaaagagtgaaaaatgttagtttggtggcactgaacaatgtggcagaattt
gtatgcaaatacaaactattataa

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