KEGG   Rattus norvegicus (rat): 364514
Entry
364514            CDS       T01003                                 
Symbol
Shld2
Name
(RefSeq) shieldin complex subunit 2
  KO
K26129  shieldin complex subunit 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    364514 (Shld2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     364514 (Shld2)
SSDB
Motif
Pfam: SHLD2_C SHLD2_OB1
Other DBs
NCBI-GeneID: 364514
NCBI-ProteinID: NP_001020199
RGD: 1565067
Ensembl: ENSRNOG00000059057
UniProt: Q5FVM8
Position
16:complement(9554921..9646186)
AA seq 911 aa
MNRGPQVHIFWGAPVAALKMTVSQETASLMSTANTWEKVQLFFKQRSLCLKAGDQEFKSL
EDCQVPEGFGPPGLLSGHLLTTYVNRSAQAEEDFKHSESETQNVKSQKISLSDMTSVCRL
TDRVQHLPEEEKYQKLPYENKKIIDEQSKTQSDACVQNFQRDVLQLDRKCAAELDLGCSS
GQKNTGPEAEEKKPEPTGHRETQSQESFASDTQCEPQSEGAVRQASGQRISPDTEFLRVM
TASQRAFLAQGNDKGQDYINKRTVNLEAEPTGSQGVRGTEGNFSEPGGDFEEGSESEQSQ
AYSLELFSPVCPESESSYGHINPGKSLEENISSPELSSREENLPQNEAHVELCGSGVLCS
QPSSSHRSTAKRSQCSKDNARHSTAHSEVHQVSKKARMDSNRREAAQAVPQKIMPEFKDS
KKISLIKNCDSKSQKYNCLVMVLTPCHVKEINVKSGPNSGSKVPLATIVVVDQSEIKKRV
VLWRTAAFWALTVFLGDIILLTDVVLYEDQWIGETVLQSTLTSQLLNLGSYSYVQPEKYS
NIIANVILQDLLTYVSSKHSYLKDLPQRQPQKINTVKFVELEQLQPDTLVHAVLRVVNIT
VLTEALYSYRGQKQRKVVLTVEQAQGQHYLLVLWGPGAAWHTQLQRKKDCIWEFKYLFVQ
RNCILENLELHTTLWSSCECLFDDDTRAISFKAKFQKNTSSFVKISDLATHLTDKYSGVV
LITARVSELVFCATAAQKVALNARSSLQSIFSSLPRITYAGCAQCGSELQTDENRIYRQC
LGCLPFVGKKMFYRPALMTIVDGRHNTYVHVGSKMMEQILFNISPDCLSRVIAPSSEVTY
GMVAADLLHSLLAVSAEPCVLKIQSLFELDENSYPLQQNLSLLDFCPDSFKMWRPGLALR
PEEDTGVVPKE
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgaatcgaggacctcaagttcacatattttggggtgctccagttgctgcactgaaaatg
acagtatcccaggaaacagcctccttaatgtccactgccaacacctgggaaaaagtccaa
ctctttttcaaacagcgttctttgtgtctgaaggctggagatcaggagtttaaaagtctg
gaagactgtcaagtccccgaaggttttggcccacccggtcttcttagtggtcacctttta
acgacttatgtgaataggtctgctcaggcggaagaagactttaaacattctgagtctgaa
acacagaatgtaaagtcccagaagattagcctaagtgatatgactagtgtatgtcgactt
acggacagagttcagcatttacctgaagaagaaaaataccaaaagcttccatatgaaaat
aagaaaattatagatgagcagtctaaaactcagtcagatgcctgcgttcagaactttcaa
agagatgtgcttcagttagatcgtaagtgtgcagctgaactggatctgggctgtagtagt
ggacagaagaatacagggccagaggctgaggaaaaaaaaccagagccaacaggacatcgt
gaaacacaaagtcaggagagctttgcctctgacacacagtgtgaaccacagtctgaggga
gcagtcaggcaggcctcaggccagagaatatctcctgatactgaatttctcagggtaatg
accgccagccagcgtgcttttctagctcaagggaatgataaaggtcaagactatattaat
aagaggactgtaaacctggaggcagaacctacaggcagtcagggagtcagaggaactgaa
gggaattttagtgagcctggtggagattttgaagaaggatctgaaagtgagcaaagccaa
gcatattccctggaactttttagtcctgtttgtcctgaatcagaaagcagttacggtcac
ataaaccctgggaaaagtcttgaagaaaatataagctctccagaactttccagtcgtgag
gaaaacctgccacaaaatgaagcacacgttgagttgtgtggctcaggagtgctgtgttcc
caaccaagcagctcccatcgaagtacagctaaaaggagccagtgctctaaggacaatgcc
cgtcattctacagctcactctgaagtccatcaggtgtccaagaaagcaaggatggattcc
aatagaagagaggcagcccaagcagtgccccagaagatcatgcctgaatttaaggatagt
aaaaaaatatcattaataaaaaattgtgattctaaaagtcagaagtataactgcttagtc
atggtgctaaccccatgtcacgtgaaggaaataaacgtaaaatctggaccgaattctggt
tctaaagtgccgttagcaacgattgtagtagtcgatcagtcggagattaagaagagggtt
gttctgtggaggactgcagcattttgggcacttacagtgtttcttggtgatataattcta
cttacagatgttgttctttatgaggaccagtggattggtgagacagtactccaatcaaca
cttaccagtcagttactgaatctgggaagttactcatatgtccagcccgaaaaatattcc
aatataattgccaatgttatacttcaggatttactgacatatgtgtcttcaaaacattcc
tatctcaaagatctgcctcagaggcagcctcagaaaatcaacaccgtaaagtttgtggaa
ttggagcagttgcagcctgatacattagtccatgcagtgctcagagtagtgaacatcact
gtattgacagaggcattatatagttacagaggacaaaagcaaagaaaggttgtgttaacg
gtggaacaggctcaaggtcaacattacctgcttgtattatggggtcctggagcagcctgg
catactcaacttcaaaggaaaaaagattgtatttgggaatttaagtacctttttgttcag
cggaactgcatactagaaaacttagaattacatacaacactgtggtcatcctgtgaatgc
ctgtttgatgatgatacaagagcaatttcatttaaagcaaaatttcaaaaaaatacatcc
tcctttgtcaagatatcagacttagcaactcacctaacagataagtattcaggagtggtt
ctgatcacagccagggtgtcagagctggtgttctgtgctacagcagctcagaaggtggct
ctgaatgctcgcagcagtctgcagagcatcttctcgtctcttccccgtatcacctatgct
ggctgtgcgcagtgcggctcagaactgcagacggatgagaacaggatctacagacagtgt
ctgggttgcttgccgtttgttgggaagaaaatgttctacagaccggctttaatgaccata
gttgatggaagacataatacttatgtccatgttgggtcgaagatgatggagcagattctt
ttcaacatttctccagattgcctcagcagagtgatagcgccttcctcagaggtcacctac
ggcatggtcgctgcggacctgctgcactccttgttggcagtcagtgcagaaccttgcgtg
ctgaagatccagagcctttttgagttggatgaaaacagctaccccctgcagcagaacctc
tccctgttagatttctgccctgactcgtttaagatgtggagaccaggacttgctctaagg
ccagaggaggacactggagttgttccaaaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (21)   
   RefSeq(nuc) (11)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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