KEGG   Rattus norvegicus (rat): 364630
Entry
364630            CDS       T01003                                 
Symbol
Thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 precursor
  KO
K24433  thrombospondin type-1 domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    364630 (Thsd1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Thrombospondin domain-containing proteins
  Other thrombospondin domain-containing proteins
   364630 (Thsd1)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin TSP1_ADAMTS
Other DBs
NCBI-GeneID: 364630
NCBI-ProteinID: NP_001102348
RGD: 1306998
Ensembl: ENSRNOG00000012108
UniProt: D3ZW62 A6IW78
Position
16:complement(76473026..76507404)
AA seq 850 aa
MKPMLKDFSNLLLVVLCDYVLGEADYLVLREPVHVALSDRTVSVGFHYLGDVNGTLRNVT
VMLWEANTNRTLTTKYLLTNQAQGTLQFECFYFKEAGDYWFVMIPEETDNGTRVPLWEKS
ASLKVEWPVFHIDLNRTAKAAEGTFQVGIFTSQPLCLFPVDKPDLLVDVIFKDSLPEART
SLGQPLEIRASKRTRLTQGQWVEFGCAPLGVEAYVTVMLRLLGQDSVIASTGPIDLAQKF
GYKLMMAPEVRCESVLEVMVLPPPCVFVQGVLAVYKEAPKAPEERTFQMAENRLPLGERR
SVFNCTLFDVGKNKYCFNFGILKKSHFSAKGCMLIQRNIETWGPWQPWSPCSTTCGDAVR
ERRRTCVTSFPSRPSCSGKPSETSPCSLEECAVFRPPDPSPDPEKYNNVVTVTGISLCLF
IIFATVLITLWRRFGRAPKCSTPARHNSIHSPGFRKNSDEENICELSEPRGSFSDAGDGP
RGSPGDTGIPLTYRCSASAPPEDEASGSESFQSNAQKIIPPLFSYRLAQQQLKEMKKKGL
TETTKVYHVSQSPLTDTVVDATASPPLDLECPEEAAASKFRIKSPFLDQPGAGPGERPPS
RLDGVLPPPSCAVSPSQTLIRKSQMRSTGGRDGSSERGHCRSSLFRRTASFHETKQARPF
RERSLSALTPRQAPAYSSRMRTWEQMEDRGRPPSRSAHLLPERPEHFQGAAGRASSPLGP
LSKSYTVGHPRRKPDPGDRQAGLVAGAAAEKMEPHRAHRGPSPSHRSASRKQTSPVFLKD
SYQKVSQLSPSHFRKDKCQSFPIHPEFAFYDNTSFRLTEAEQRMLDLPGYFGSNEEDETT
STLSVEKLVI
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgaaacccatgttgaaagacttttcaaatctcttgctggtggtgctctgtgactatgtc
cttggagaagccgactacctcgtcttacgagagccagtccacgtggcgctgagcgaccga
acggtgtcagtgggtttccactacctcggtgacgtcaacgggacactgaggaatgtgact
gtcatgctgtgggaggccaacaccaaccggactcttaccactaagtacctcctgaccaac
caggcccagggaacactccagtttgaatgcttctacttcaaggaggctggtgactactgg
tttgtgatgatcccagaagagacagacaatggcacacgagttcccctctgggagaaaagt
gcctctctgaaggtcgaatggcccgtctttcacatcgatttaaataggacagccaaggcg
gcagaaggcaccttccaagtgggtatttttacctcccaaccgctctgcctgtttcctgtg
gacaagccagacctgctggtggatgtcatcttcaaggacagccttcctgaggcaagaaca
agtttgggacagccgctggagatccgagccagcaaaaggacaagactcactcaaggccag
tgggtcgagtttggctgtgcacccctaggggtggaagcctacgttacggtgatgctgagg
cttttgggtcaagactcagtcattgcttcgacgggacctattgacctggcccaaaagttc
ggatacaaattgatgatggcaccggaagtcaggtgtgagtctgtcctggaggtgatggta
ctgccacctccttgtgtctttgtccaaggagtgctggctgtttacaaagaagcccccaaa
gccccggaggagaggaccttccagatggctgaaaacaggctgcccctgggagagaggaga
tcggtgtttaactgcactttgtttgatgtggggaagaacaagtattgctttaactttgga
attttgaagaaaagccatttttctgcaaagggatgcatgctaattcagagaaatatagaa
acttggggaccatggcagccgtggagcccgtgtagcaccacgtgcggggatgctgtccga
gagcgtcgccgcacgtgcgtcacttccttcccctccagacccagctgctctggaaagccc
tcagagacctctccatgctccctggaggagtgtgctgttttccggccaccagacccatcg
ccggacccggagaagtacaacaacgtggtgaccgtcacagggatatccctgtgcttgttc
atcatctttgccaccgtgctcatcaccctctggaggagattcggcagagcccccaaatgc
agcacgccggcccgccacaactccatccattcccccggcttccggaagaactcggatgag
gagaacatctgcgagctgagcgagcctcgcggaagcttctcggatgcgggggacgggccc
aggggaagcccaggggacacgggcatcccgttgacttaccggtgcagtgcgtcagcgcct
cctgaggacgaggcctccggcagtgagagctttcagtccaacgctcagaagatcatcccg
cccctgtttagctaccgcctggcccagcagcagctgaaggagatgaagaagaaagggctg
acagagaccaccaaagtgtaccacgtgtctcagagccccctgacagacacggtagtggat
gccactgccagcccccccttagacctggagtgccccgaagaggcagcagcaagcaagttc
cggatcaagtctccttttctggaccagcctggggcaggtcccggggaaaggcccccctcc
aggctggatggcgtcctgcctccgcccagctgtgcggtcagccccagccagacgctgatc
cgcaagtcccagatgaggtcgactggtgggagagatggctcgtcggagcggggccactgc
agaagttccctcttccggaggactgctagttttcacgaaaccaagcaggctcgccctttc
agggagaggagtttgtcagccctgactccccgccaggcccccgcctacagttccaggatg
aggacctgggagcagatggaggataggggtcggcctcccagtcgaagtgctcacctgctt
ccagagaggccggaacacttccaaggggcggcaggtcgggccagcagtcctttgggtcca
ctctccaaatcctacactgtggggcatcccaggaggaaacccgacccgggggatcgccag
gctgggttggtggcaggagctgctgcggagaaaatggagcctcaccgagctcacagggga
ccgtcccccagtcacaggagtgcgtcaaggaagcagacttcccccgttttcctcaaggac
agctaccagaaagtcagtcagcttagcccttctcacttcaggaaagataaatgccagagc
ttccccatccaccctgagttcgccttctacgacaacacctctttccgcctcaccgaggct
gagcagagaatgctggacctcccgggatactttggctccaacgaagaggacgaaaccact
agtacactgagcgtggagaagttagtaatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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