KEGG   Rattus norvegicus (rat): 364834
Entry
364834            CDS       T01003                                 
Symbol
Polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03020  RNA polymerase
rno03420  Nucleotide excision repair
rno05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    364834 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    364834 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    364834 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    364834 (Polr2d)
   03400 DNA repair and recombination proteins [BR:rno03400]
    364834 (Polr2d)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     364834 (Polr2d)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      364834 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 364834
NCBI-ProteinID: NP_001102356
RGD: 1308565
Ensembl: ENSRNOG00000016231
UniProt: A6J2P3
Position
18:23692578..23699709
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcaggtggaagcgatcctcgagctggcgacgtagaagaagatgcttcccagctc
atctttcccaaagagttcgaaacagctgagacgctcctgaactctgaagttcacatgctt
ctggagcaccgaaagcagcagaatgagagtgcggaggacgaacaggagctttcagaggtt
ttcatgaaaaccctgaactatacagcccgtttcagccggttcaaaaacagagagaccatt
gccagtgttcgtagcctgcttctccagaagaagttacataagtttgaattggcttgttta
gccaatctgtgcccggagactgctgaggagtccaaagcgctgattccaagcctggaaggg
cgttttgaagatgaggaactgcagcagattcttgatgatatccagacgaagcgcagcttc
cagtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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