KEGG   Rattus norvegicus (rat): 365024
Entry
365024            CDS       T01003                                 
Symbol
Chmp1a
Name
(RefSeq) charged multivesicular body protein 1a
  KO
K12197  charged multivesicular body protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    365024 (Chmp1a)
  09143 Cell growth and death
   04217 Necroptosis
    365024 (Chmp1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    365024 (Chmp1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    365024 (Chmp1a)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    365024 (Chmp1a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   365024 (Chmp1a)
  Exosomal proteins of other body fluids (saliva and urine)
   365024 (Chmp1a)
  Exosomal proteins of colorectal cancer cells
   365024 (Chmp1a)
SSDB
Motif
Pfam: Snf7 Ist1 DUF2868
Other DBs
NCBI-GeneID: 365024
NCBI-ProteinID: NP_001076782
RGD: 1311083
Ensembl: ENSRNOG00000016001
Position
19:complement(68146672..68154952)
AA seq 196 aa
MDDTLFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGV
NWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQ
NLDVHTSVMEDSVSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEGASAVGESSV
RSQEDQLSRRLAALRN
NT seq 591 nt   +upstreamnt  +downstreamnt
atggacgataccctgttccagttgaagttcacagcaaagcagctggagaaactagccaag
aaggcagagaaggactccaaggctgagcaggccaaagtgaagaaggcccttcagcagaaa
aatgtggagtgtgcccgtgtgtatgctgaaaacgccatccgcaagaagaatgaaggcgta
aactggctccggatggcatcccgtgtggacgcagtggcctccaaggtgcagacagctgtg
accatgaagggggtgaccaagaacatggctcaggtgaccaaagctctggacaaggccctg
agtgccatggaccttcagaaggtgtctgcagtgatggacaggtttgagcagcaggtgcag
aacctggatgtgcacacatcggtgatggaggattctgtgagctctgccactacactgacc
acacctcaggagcaggtcgacagcctcatcgttcagattgctgaggagaatggcctggag
gtccttgaccaactcagccagcttccggagggagcctctgccgtgggcgaaagctctgtg
cgcagccaagaggaccaactgtctcggaggttggctgccctgaggaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system