KEGG   Rattus norvegicus (rat): 365222
Entry
365222            CDS       T01003                                 
Symbol
Lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    365222 (Lrfn1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   365222 (Lrfn1)
SSDB
Motif
Pfam: LRR_8 LRR_4 I-set Ig_3 ig Ig_2 fn3 LRR_9 CbiM Sp38
Other DBs
NCBI-GeneID: 365222
NCBI-ProteinID: NP_001121166
RGD: 1304707
Ensembl: ENSRNOG00000019869
UniProt: P0C7J6
Position
1:92866864..92888984
AA seq 766 aa
MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
DSATERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRSPPRVSHVCSQTNGSSAQQASAPPA
PDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGGSATSLCLLPSEETSGEESRA
VTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGDYGALFQSHSYPRRARR
TKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggctccaggccccttctcctccgggctcctctcgccaccacctgctgctctccctttt
ctgctgctgctctgggcaggagcatctcgtggccagccctgccccggtcgctgcatctgt
cagaacgtggcacctacactgaccatgctgtgtgccaagaccggcctgctcttcgtgcca
cccgccatcgacaggcgtgtggtagagctgcggctcactgacaacttcattgcggctgtg
cgtcgtcgagacttcgccaatatgaccagcctggtccacctcaccctgtctcgaaacacc
attggccaggtagcagctggcgcctttgctgacctccgtgctctccgggccctgcatctt
gacagcaatcgtcttgcagaagtgcgaggggaccagctccggggcttgggtaacctccgc
cacttgatccttggcaacaatcagatccgtaaggtggagtcggcagcctttgacgctttc
ctgtccaccgtggaggacctggatctatcctacaacaacctggaggcactgccatgggag
gcggtgggtcagatggtgaacttgaacaccctcacgctggaccacaacctcattgatcac
attgcggagggcaccttcgtgcagctgcacaaactcgtgcgcttggacatgacctctaac
cgcctacataaactgccccccgacggactgttcctgaggtcccagggcggtgggcccaag
ccacctaccccactgaccgtcagcttcggtggcaacccgctgcactgcaactgtgaactg
ctctggcttcggcgcctgaccagggaggatgacttggagacatgtgccacgcccgagcat
ctcactgaccgctatttctggtccatccccgaggaggaatttctctgtgagcccccgctc
atcacacgacaggcaggcggccgggccctagttgtggagggccaggctgtcagtctgcgc
tgccgggcggtgggtgacccagagcccgtggtgcattgggtggcaccggatgggcggctg
ctggggaactccagccggactcgggtccgtggtgacggaacgctggatgtgactatcacc
accctgagggacagcggtaccttcacttgcatagcctccaatgctgcaggggaagccact
gcacctgtggaggtatgtgtggtgcctctgccactcatggcgcccccacctgctgccccg
ccgcctctcactgaacctggttcttctgacatcgccacaccgggcagacctggtgccaac
gactcagccactgagcgcaggcttgtggctgctgaacttacgtccagctctgtgctcatc
cgctggccggcccagaggccagtgcctggcatccgcatgtaccaagtgcaatacaacagc
tctgcggatgactccctagtctacaggatgatcccttctaccagccagaccttcctggtg
aatgatttggcggctggccgcgcctatgatttgtgtgtgttggcagtctacgacgatggg
gccaccgctctgccggccaccagagtggtgggctgtgtgcaattcaccaccgcgggagat
cctgcaccatgccgcccgctgagggcccacttcttgggcggcaccatgatcatcgccatc
gggggcgtcatcgtagcctcggtcctcgttttcatcgttctgctcatgattcgctacaaa
gtgtatggcgatggggacagccgccgcatcaaggggacgtccagatcgccccctcgggtc
agccacgtgtgctctcagaccaatggttcaagtgcacagcaagcctccgccccaccagct
ccagaccgctacgaggcgctgcgggaggtggctgtccctgcagccatcgaggcaaaggcc
atggaggccgaggcgacttccactgagctagaggtggtgcttggacgctctctgggtggc
tcggccacctctctgtgcttgctgccctccgaggaaacttcaggggaggaatctagggcc
gtaaccggccctcgaaggagccgttcgggggccttggggcctccaacttcagcaccccca
acgctagctctggttcgtgggggatccccggcccggccgaggccacaacaacgctattcc
tttgatggggactacggggcgctgttccagagtcacagttacccgcgccgcgcccggcgg
acaaagcgccaccggtccacgccccacctggacggggctggagggggcgcggccggggag
gacggagacctggggctgggctccgcccgggcacgcctggccttcaccagcaccgaatgg
atgctggagagtacggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (10)   
   Pfam (10)   
All databases (48)   

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