KEGG   Rattus norvegicus (rat): 365360
Entry
365360            CDS       T01003                                 
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform 1
  KO
K21988  transmembrane channel-like protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    365360 (Tmc5)
   03037 Cilium and associated proteins [BR:rno03037]
    365360 (Tmc5)
Transporters [BR:rno02000]
 Other transporters
  Pores ion channels [TC:1]
   365360 (Tmc5)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   365360 (Tmc5)
SSDB
Motif
Pfam: TMC
Other DBs
NCBI-GeneID: 365360
NCBI-ProteinID: NP_001388555
RGD: 1307037
Ensembl: ENSRNOG00000036760
Position
1:182349102..182433679
AA seq 965 aa
MSSFHKNSSYMEDPDYPGYSGSQNHTQNYLRTQDDLEFPGCLDNPGFHHPRRNPYSSDSR
TNPDYHHSLAEPDYPGSPSDADYQNTRCHPRSAHPRTRPDYEPDYEPDYNDFQSESYHPD
LSMEPDYPGSHGHPGFAGVRSSVNSTGPRTNLGYLDLEEPDYPGAQGNSYHSGPRSHSNL
PGSRRNAGYAGSRINSYPDSLGEPDYPGAENQPNSPDFYGKPDYPGAEEGDVYSPSKTLG
VIGRSRGSFGILGREDGDYPEGIEMASLGMAGDPRNGYVNPAYMRGSSPVCPDRNLLLCA
RDWNTSPQGQKLIASLVPMTSRDRIKTIRNQPRTMQEKRELRKIVDKEKNKQSHGTFEAN
CCAQCLSSLSLAYRRTKSSLSELLNYISLWQKRFKVIGGKFGTSVLSYFSFLRWLLKFNI
FSFVMNFSFIIIPQFTVGEKNTLQFTGLEFFTGAGYFRETVMYYGFYTNSTIRHRMGGAS
YNMQLAYIFTIGACLVICFFSLLFSMAKYFRNNFINPHIYSRGIAKLIFCWDFTVTHEKA
VKLKQKNLSTEIRENLSEIRQENDRLTLNQKLTRFSVHVAAWLVSTGITAACCVAVYYLA
EYNSEFLKTHKNPGAVLLLPFVVSCINLAVPRFYSMFRLVERYEIPRQEVYVLLIRNIFL
KISIVGILCYYWLNIVALSGEECWETLIGQDIYRLLLMDFVFSLADSLLGEFLRRLIGMK
FITSLSLQEFDIARNVLELIYAQTLAWLGIFFCPLLPFIQMITLFIMFYVKNVSLMMNFQ
PPSKAWRASQMITFFIFLLFFPSFTGVLCTLAITIWRLKPSADCGPFRGLPSFIQSIYSW
IDTLSHRPGYLWVVWIYQNLIGSVHFFFILTLIVLIITYLYWQITEGRKVMIRLLHEQII
NEGKDKMFLIEKLTKLQDIERRANPSTLVLERREVEQQSPLHLEELDAAPDLRLRRSMQE
ENAIA
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgtcttccttccacaagaatagcagctatatggaagatcctgactaccctggttattca
gggtctcagaaccacacgcagaactatttgagaactcaagatgatctggaattcccaggg
tgtctggacaatccaggcttccaccaccccagaagaaacccatattcttcggactctaga
acaaatccagactaccaccactccctagcagaaccagattatcctggatctccgagtgac
gcagactatcaaaataccaggtgtcacccacgctccgcacatcccagaaccaggccagac
tatgagccagactatgagccagactataatgacttccagagcgaatcctatcacccagat
ttatctatggagcctgactaccctggctctcacggtcatcctggttttgcaggagtccga
agcagtgtgaactctacaggtcctagaaccaatctaggctatttggatctggaagagcca
gactaccctggagctcaaggcaactcttaccattctggccccagatcccattccaacctg
ccaggctccagaagaaatgcaggctatgctgggtccagaatcaattcctacccagactct
ttgggggaacctgattacccaggtgccgagaaccaaccaaactctcccgacttttatgga
aagccagactatcctggtgctgaagagggcgatgtctacagtccttctaagactctggga
gtcatcgggaggagtcgtggctcctttggcatactagggagagaggatggagattaccct
gaaggcattgaaatggcatccctggggatggcaggtgatcctagaaatggctatgtgaac
cctgcttacatgagaggaagcagtcctgtctgtccagatagaaacctgttgctgtgcgca
cgtgattggaacacatcaccccaaggacaaaaactaattgcatccctggttcccatgaca
tccagagacagaatcaaaaccatcagaaaccagcccaggaccatgcaagagaagagggag
cttagaaagatagttgacaaagaaaaaaacaaacagtctcatggtaccttcgaggccaac
tgctgtgctcagtgtctcagctccctttccctggcttaccgaagaaccaagagcagcctt
tcagagctcctcaattacatcagcctgtggcagaagagattcaaggtcatcggaggcaag
tttggaaccagcgtcctgtcctatttcagcttcctgaggtggcttttgaagttcaacatc
ttctcattcgtcatgaacttcagcttcatcatcatcccacaattcaccgtgggtgagaag
aacaccctccagttcactggcttggagtttttcacaggggcgggttattttagggagacg
gtgatgtactatgggttttacaccaactctaccatccggcataggatgggcggagcgtcc
tacaacatgcagctggcctacatcttcacaatcggagcctgcctggtcatctgcttcttc
agtctactcttcagcatggctaagtacttccggaacaacttcatcaacccccacatatac
tccagagggattgctaaactcatcttttgctgggatttcactgtcactcatgaaaaagct
gttaagctaaaacagaagaatctgagcacagagatcagggagaacctgtctgagatccgc
caggagaacgacaggctcacactcaaccagaagctgacccgattttctgttcacgtagcc
gcctggctcgtctctactggaataaccgcagcctgctgtgtagctgtatattacttggct
gagtataactctgagttcctgaagacgcacaagaaccccggggcggtgttgttactgccc
ttcgttgtatcctgcatcaacctggctgttcctcgcttctactccatgttccgcctggtg
gagaggtatgagataccgagacaggaagtctacgtcctcttgatccgaaacatctttctg
aagatctccattgttggaattctttgttactattggctcaacatcgtggccctgtctggc
gaagagtgctgggagaccctcattggccaggacatctaccgtctccttctcatggacttc
gtgttctccttggccgactccttactgggggagtttctgagaaggctcattgggatgaaa
ttcatcaccagtctcagcttacaggagtttgacattgccaggaatgttctagaactgatc
tatgcacaaactctggcctggcttggaattttcttctgccctctgctgccttttatccaa
atgatcactctcttcattatgttttatgtcaaaaatgtcagcctgatgatgaacttccag
cctccaagcaaggcctggcgggcctcacagatgataaccttcttcatttttttgctcttc
ttcccgtccttcacgggagtgctgtgcaccctggctatcaccatctggagactgaagcct
tcggctgactgtggcccattccgaggtctgccttccttcatccagtccatctacagctgg
atcgacaccctgagtcacaggcctggctacctgtgggtcgtctggatctaccagaacctc
attggaagcgtgcacttctttttcatcctcaccctcattgtgctgatcatcacctatctt
tactggcagattacagagggaaggaaggtcatgatccggctgctccatgaacagatcatt
aatgagggcaaagataagatgttcctgatagaaaaattgaccaagctgcaggatatagag
cggagagccaaccccagtacgcttgtcctggaaaggagagaagtggagcaacaaagccct
ttgcatttggaggaacttgatgctgctcctgacctgcgactgaggcggtcaatgcaagaa
gagaatgccatagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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