KEGG   Rattus norvegicus (rat): 365388
Entry
365388            CDS       T01003                                 
Symbol
Psmd13
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 13
  KO
K03039  26S proteasome regulatory subunit N9
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    365388 (Psmd13)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    365388 (Psmd13)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    365388 (Psmd13)
   05012 Parkinson disease
    365388 (Psmd13)
   05014 Amyotrophic lateral sclerosis
    365388 (Psmd13)
   05016 Huntington disease
    365388 (Psmd13)
   05017 Spinocerebellar ataxia
    365388 (Psmd13)
   05020 Prion disease
    365388 (Psmd13)
   05022 Pathways of neurodegeneration - multiple diseases
    365388 (Psmd13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    365388 (Psmd13)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     365388 (Psmd13)
SSDB
Motif
Pfam: PCI Rpn9_C DUF4953
Other DBs
NCBI-GeneID: 365388
NCBI-ProteinID: NP_001102395
RGD: 1305236
Ensembl: ENSRNOG00000014109
UniProt: B0BN93
Structure
Position
1:205394248..205406525
AA seq 376 aa
MKDVPAFLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLY
ENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGA
LKLNIGDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFL
GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF
NSGDVDRFQTLKSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSA
KITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELWCTDV
KSMELLVEHQAQDILT
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgaaggatgtgccggccttcttacagcagagtcagagctccgggccgggccaggccgcc
gtttggcaccgtttggaagagctatacacgaagaagttatggcatcagctgacacttcag
gtgcttgattttgtgcaggacccatgctttgcccaaggagatggcctcattaagctctat
gaaaacttcatcagtgaatttgagcacagggtaaaccctttgtccctggtagaaataatt
cttcatgtggttagacagatgaccgatcctaatgtggctcttacttttctggaaaagact
cgtgagaaggtaaaaagtagtgatgaagccgtgatcttgtgtaagacagcaatcggagct
ctaaaattgaacatcggggatctgcaggctacaaaggaaaccattgaagatgttgaagag
atgctcaacaatctccctggtgtgacgtcagttcacagtcgtttctacgatctctccagt
aaatactatcaaacaatcggaaaccacgcgtcctactacaaagatgccctacggtttctg
ggctgtgtagacataaaggatctgccagtatcagaacagcaagaaagagccttcacactg
gggcttgctggacttctcggagagggagtttttaactttggagaacttctcatgcatcct
gtgctggagtcactgaggaacactgaccggcagtggctgattgacaccctgtatgctttc
aacagtggtgatgtagataggttccagacactgaagtctgcctggggccagcagcctgac
ttagcagccaacgaggcccagcttctgaggaagatccagctgttgtgccttatggagatg
acgttcacacggcctgccaaccacagacaactcacttttgaggaaattgccaaaagtgcc
aagatcactgtcaacaaggtggagctgttggtgatgaaggcactctcggtggggctggtg
agaggcagcatagacgaggtggacaagcgggttcacatgacgtgggtgcagcctcgagtg
ctggatttgcagcagatcaaggggatgaaggaccgtctggagctctggtgcactgatgtg
aagagcatggagctgctggtagaacaccaggctcaagacatcctcacctaa

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