KEGG   Rattus norvegicus (rat): 365391
Entry
365391            CDS       T01003                                 
Symbol
Trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
  KO
K04980  transient receptor potential cation channel subfamily M member 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    365391 (Trpm5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    365391 (Trpm5)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   365391 (Trpm5)
SSDB
Motif
Pfam: LSDAT_euk LSDAT_prok Ion_trans HTH_15
Other DBs
NCBI-GeneID: 365391
NCBI-ProteinID: NP_001178825
RGD: 1310620
Ensembl: ENSRNOG00000020484
UniProt: A0A455XI77
Position
1:complement(207684811..207707380)
AA seq 1164 aa
MPGVRKVTMPMAQSSCPGSPPDTGDGWEPVLCKGEVNFGGSGKKRSKFVKVPSNVAPSML
FELLLTEWHLPAPNLVVSLVGEERLFAMKSWLRDVLRKGLVKAAQSTGAWILTSALHVGL
ARHVGQAVRDHSLASTSTKVRVVAIGMASLDRILHRQLLDGVQEDTPIHYPADEGSTQGP
LCPLDSNLSHFILVEPGTLGSGNDGLAELQLSLEKHISQQRTGYGGTSSIQIPVLCLLVN
GDPSTLERMSRAVEQAAPWLILAGSGGIADVLAALVGQPHLLVPQVTEKQFREKFPSECF
SWEAIVHWTELLQNIAAHPHLLTVYDFEQEGSEDLDTVILKALVKACKSHSRDAQDYLDE
LKLAVAWDRVDIAKSEIFNGDVEWKSCDLEEVMTDALVSNKPDFVRLFVDSGADMAEFLT
YGRLQQLYHSVSPKSLLFELLERKHEEGRLTLAGLGAQQTRELPVGLPAFSLHEVSRVLK
DFLHDACRGFYQDGRRMEERGPPKRPAGQKWLPDLSRKSEDPWRDLFLWAVLQNRYEMAT
YFWAMGREGVAAALAACKIIKEMSHLEKEAEVARTMREAKYEQLALDLFSECYSNSEDRA
FALLVRRNHSWSRTTCLHLATEADAKAFFAHDGVQAFLTKIWWGDMATGTPILRLLGAFT
CPALIYTNLISFSEDAPQRMDLEDLQEPDSLDMEKSFLCSHGGQLEKLTEAPRAPGDLGP
QAAFLLTRWRKFWGAPVTVFLGNVVMYFAFLFLFSYVLLVDFRPPPQGPSGSEVTLYFWV
FTLVLEEIRQGFFTNEDTRLVKKFTLYVEDNWNKCDMVAIFLFIVGVTCRMVPSVFEAGR
TVLAIDFMVFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLVAYGVTTQALL
HPHDGRLEWIFRRVLYRPYLQIFGQIPLDEIDEARVNCSLHPLLLDSSASCPNLYANWLV
ILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYHLIVEYHGRPALAPPFI
LLSHLSLVLKQVFRKEAQHKQQHLERDLPDPVDQKIITWETVQKENFLSTMEKRRRDSEE
EVLRKTAHRVDLIAKYIGGLREQEKRIKCLESQANYCMLLLSSMTDTLAPGGTYSSSQNC
GRRSQPASARDREYLEAGLPHSDT
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgcccggagttcgaaaagtcacaatgccgatggcccagagctcttgtcctggaagcccc
ccagatactggggatggatgggagccagtcctatgcaagggagaggtcaacttcggaggg
tctgggaaaaagcgaagcaagtttgtgaaggtgccaagcaatgtggccccctccatgctc
tttgaactcctgctcaccgagtggcacctgccagcccccaacctggtggtgtccctggtg
ggcgaggaacggctttttgctatgaagtcctggcttcgggatgtcttgcgcaaggggctg
gtgaaagcagctcagagcacaggtgcctggatcctgaccagtgccctccatgtgggcctg
gcacgccatgttggacaggctgtacgtgatcactctctggctagcacgtccaccaaggtc
cgtgtggtggccatcggaatggcctctctggaccgaatccttcaccgccaacttctagat
ggtgtccaggaggatactcccatccactacccagcagatgagggcagcactcagggaccc
ctctgccctctggacagcaatctctcccacttcatcctcgtggagccaggcacccttggg
agtgggaacgacggactggcagagctgcagctgagcctggagaagcacatctctcagcag
aggacaggttatgggggtaccagcagcatccagatacctgtcctttgcttgctagtcaat
ggtgaccccagcaccctagagaggatgtccagggcagtggagcaggctgccccatggctg
atcctggcaggttctgggggcattgctgatgtactcgctgccctggtgggccagcctcat
ctcctggtgccccaggtgaccgagaagcagttcagagagaaattcccaagcgagtgtttc
tcttgggaagccattgtacactggacagagctgctacagaacattgctgcacacccccac
ctgctcacagtgtacgactttgagcaggagggttccgaggacctggacaccgtcatcctc
aaggcacttgtgaaagcctgcaagagtcacagccgagacgcacaagactacctagatgag
ctcaagttagcagtggcctgggatcgcgtggacattgccaagagtgaaatcttcaatggg
gacgtggagtggaagtcctgtgacttggaagaggtgatgacagatgccctagtgagcaac
aagcctgacttcgtgcgcctctttgtggacagtggtgctgacatggccgagttcttgacc
tatgggcggctgcagcagctttaccactctgtgtcccccaagagcctcctctttgaactg
ctggagcgtaagcatgaggagggtcggctgacactggctggcctgggtgcccagcagacc
cgggagctgcccgttggtctgcctgccttttcactccatgaggtctcccgagttctcaaa
gatttcctgcatgacgcctgccgtggcttctaccaggatgggcgcaggatggaggagaga
gggccacccaagcggcctgcaggccagaaatggctgccggacctcagtcggaagagtgaa
gacccatggagggacctgttcctttgggctgtgctgcagaaccgttatgagatggccaca
tacttctgggccatgggccgggagggtgtggctgctgctctggcggcctgcaagatcatc
aaggaaatgtcccacctggagaaagaggcagaggtggcccgcactatgcgtgaggccaag
tatgagcagctggccctcgatcttttctcagagtgctacagcaacagtgaggaccgtgcc
tttgccctgttggtgcgcaggaaccacagctggagcaggaccacctgcctgcacctggcc
actgaggccgatgccaaggccttctttgcccatgatggtgtgcaagcattcctgacgaag
atctggtggggagacatggccacaggcacacccatcttacgacttctgggtgccttcacc
tgcccagccctcatctacacaaatctcatctccttcagtgaggatgccccgcagaggatg
gacctggaagatctgcaggagccagacagtttggatatggaaaagagcttcctgtgcagc
catggtggccaattggagaagttaacagaggcgccaagggctcctggcgatctaggccca
caagctgccttcctgctcacacggtggaggaagttctggggcgctcctgtgactgtgttc
ttggggaatgtggtcatgtactttgcattcctcttcctattctcctacgtcctgctggtg
gatttcaggccaccaccccaggggccatctgggtcggaagttaccctgtatttctgggtc
ttcacactggtgctggaggaaatccgacagggattcttcacaaacgaggacacccgtctg
gtgaagaagttcactctgtacgtagaagacaactggaacaaatgtgacatggtggccatc
ttcctgttcattgttggtgtcacctgtagaatggtgccctccgtgtttgaggctggccgg
actgttctggccattgacttcatggtgttcacacttcggctcatccacatctttgctatt
cacaagcagctgggtcctaagatcatcattgtagagcggatgatgaaagatgtcttcttc
ttcctcttcttcctgagcgtgtggctcgtggcctatggcgtgaccactcaggccctgctg
cacccccacgatggccgtctggagtggattttccgccgtgtgctctacaggccttacctg
cagatctttgggcaaatccctctggatgaaattgatgaggcccgtgtgaactgctctctt
cacccgttgctgctggacagctcagcttcctgccctaatctctatgccaactggctggtc
attctcctgctggttaccttcctcctcgtcactaatgtgctacttatgaaccttctgatc
gccatgttcagctacacattccaggtggtgcagggcaatgcagacatgttctggaagttt
caacgctaccacctcatcgttgaataccacggaaggccggctctggccccgcccttcatc
ctgctcagccacctgagcctggtgctcaagcaggtcttcaggaaggaagcccagcacaaa
cagcaacacctggagagagacttgcctgaccccgtggaccagaagatcattacctgggaa
acagttcaaaaggagaacttcctgagtaccatggagaaacggaggagggacagtgaggag
gaggtgctgaggaaaacggcacacagagtggacttgattgccaaatacatcgggggtctg
agagagcaagaaaagaggatcaagtgtctggagtcacaggccaactactgtatgctcctc
ttgtcctccatgactgacacactggctcctggaggcacctactcaagttctcaaaactgt
ggtcgcaggagtcagccagcctctgctagagacagggagtacctagaggctggcttgcca
cactcagacacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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