KEGG   Rattus norvegicus (rat): 365527
Entry
365527            CDS       T01003                                 
Symbol
RT1-M6-2
Name
(RefSeq) RT1 class I, locus M6, gene 2 precursor
  KO
K06751  MHC class I antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04218  Cellular senescence
rno04514  Cell adhesion molecules
rno04612  Antigen processing and presentation
rno04940  Type I diabetes mellitus
rno05163  Human cytomegalovirus infection
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
rno05320  Autoimmune thyroid disease
rno05330  Allograft rejection
rno05332  Graft-versus-host disease
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    365527 (RT1-M6-2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    365527 (RT1-M6-2)
   04145 Phagosome
    365527 (RT1-M6-2)
  09143 Cell growth and death
   04218 Cellular senescence
    365527 (RT1-M6-2)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    365527 (RT1-M6-2)
   04612 Antigen processing and presentation
    365527 (RT1-M6-2)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    365527 (RT1-M6-2)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    365527 (RT1-M6-2)
   05170 Human immunodeficiency virus 1 infection
    365527 (RT1-M6-2)
   05168 Herpes simplex virus 1 infection
    365527 (RT1-M6-2)
   05163 Human cytomegalovirus infection
    365527 (RT1-M6-2)
   05167 Kaposi sarcoma-associated herpesvirus infection
    365527 (RT1-M6-2)
   05169 Epstein-Barr virus infection
    365527 (RT1-M6-2)
   05165 Human papillomavirus infection
    365527 (RT1-M6-2)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    365527 (RT1-M6-2)
   05330 Allograft rejection
    365527 (RT1-M6-2)
   05332 Graft-versus-host disease
    365527 (RT1-M6-2)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    365527 (RT1-M6-2)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    365527 (RT1-M6-2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    365527 (RT1-M6-2)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    365527 (RT1-M6-2)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   365527 (RT1-M6-2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Antigens
  365527 (RT1-M6-2)
SSDB
Motif
Pfam: MHC_I C1-set ig
Other DBs
NCBI-GeneID: 365527
NCBI-ProteinID: NP_001008853
RGD: 1595815
Ensembl: ENSRNOG00000040052
UniProt: Q6MFY3
Position
20:1588501..1592333
AA seq 332 aa
MGAPVLHATLLLLSAFLALTQTKNQSFAGSHSRQYLVTATTSRPGLRDPHVFIVGYVDHM
PFMRFDSDGVAQRIQARGPWVKQMGPEYLEMERKNAERYSHRARENLRFAIQVYNQSDKG
HHRHAFDGQHYISLNSDLTTWSVADSTAQITKRRWEADGVAEAFSHFLKVSCVEWLQKHL
ETGKETLQRSDPPKTHVTHHPRPEGDATLRCWALDFYPADITLTWQEEEEEEELTQDMEL
VETRPAGDGTFQKWASVVVPSGEEQKYTCHVYHEGLPEPLTLRWKPATWPVVGITVGVVL
LGFVTIGALIAIVTMRKKRADPVDPVDLMDPV
NT seq 999 nt   +upstreamnt  +downstreamnt
atgggggctccagtgctgcatgccaccctcctgctgctctcagccttcctggctctgacc
caaaccaagaaccagagttttgctggttcacactccaggcagtatttggtaaccgcgacc
acgtctcgaccgggtcttagagatccccatgtcttcattgttggctatgtggaccacatg
ccatttatgcgctttgacagtgatggagttgctcagaggatccaggcaagaggaccttgg
gtgaagcagatggggcctgagtatttggaaatggagagaaagaatgcggagaggtattca
cacagggctcgagaaaacctgcgattcgcaatccaggtctataaccagagcgataaaggg
catcatagacatgcttttgacggccaacattacatcagcctgaactcggacctgacaaca
tggagtgtcgcagacagcacagctcagatcaccaagcgacggtgggaggcagatggtgta
gcagaggccttcagtcacttcttgaaagtctcttgtgttgaatggctgcagaagcacttg
gagacagggaaggagactctacagcgctcagatcccccaaagacacatgtgacccatcac
cccagacctgaaggtgatgccaccctgaggtgttgggccctggacttctaccctgctgac
atcaccctgacctggcaggaggaggaggaggaggaggaactgacacaggacatggagctt
gtggagaccaggcctgcaggggatggaaccttccagaagtgggcatctgtggtggtgcct
tctggggaggagcagaaatacacttgtcatgtgtaccatgaggggctgcctgagcccctc
acactgagatggaaaccagcaacttggcctgtggttggaataactgttggtgtagttctc
cttgggtttgtcaccattggagctctgattgccattgtgaccatgaggaagaagagagca
gaccctgtggatcctgtggaccttatggatccagtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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