KEGG   Rattus norvegicus (rat): 365601
Entry
365601            CDS       T01003                                 
Symbol
Atg5
Name
(RefSeq) autophagy protein 5 isoform 1
  KO
K08339  autophagy-related protein 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04136  Autophagy - other
rno04140  Autophagy - animal
rno04211  Longevity regulating pathway
rno04213  Longevity regulating pathway - multiple species
rno04216  Ferroptosis
rno04621  NOD-like receptor signaling pathway
rno04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    365601 (Atg5)
   04136 Autophagy - other
    365601 (Atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    365601 (Atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    365601 (Atg5)
   04622 RIG-I-like receptor signaling pathway
    365601 (Atg5)
  09149 Aging
   04211 Longevity regulating pathway
    365601 (Atg5)
   04213 Longevity regulating pathway - multiple species
    365601 (Atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    365601 (Atg5)
   03029 Mitochondrial biogenesis [BR:rno03029]
    365601 (Atg5)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    365601 (Atg5)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    365601 (Atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 365601
NCBI-ProteinID: NP_001014272
RGD: 1359580
Ensembl: ENSRNOG00000000322
UniProt: Q5XIS0
Position
20:49380835..49471826
AA seq 217 aa
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPCKDA
VEAHFMSCVKEADALKHKSQVINEMQRKDHKQLWMGLQNDLTSFGPSTGNSWNTLQKKMD
FVISLLEYIRPQLNGLSFRSCSVLWPQMDSCIPLEIS
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacagatgacaaagatgtgcttcgagacgtgtggtttggacggattccaacgtgcttt
actctctatcaggatgagataactgaacgagaagcagagccatactatttgcttttgcca
agagtcagctatttgacgctggtaactgacaaagtgaaaaagcactttcagaaggttatg
agacaagaagatgttagtgagatttggtttgaatatgaaggcacacccctgaaatggcat
tatccaattggcctactgttcgatcttcttgcatcaagctcagctctgccttggaacatc
acagtacatttcaagagttttccagaaaaggaccttctgcactgtccgtgcaaggatgca
gttgaggctcactttatgtcatgtgtgaaggaagctgacgctttaaagcacaaaagtcag
gtgatcaacgaaatgcagagaaaagaccacaagcagctctggatgggactgcagaatgat
ttgaccagttttggaccatcaaccggaaactcatggaataccctccagaagaaaatggat
ttcgttatatcccttttagaatatatcagaccacaactgaacggcctttcattcagaagc
tgttccgtcctgtggccgcagatggacagctgcatacccttggagatctcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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